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FGD5P1 (FYVE, RhoGEF and PH domain containing 5 pseudogene 1)

Identity

Other alias-
HGNC (Hugo) FGD5P1
LocusID (NCBI) 100132526
Atlas_Id 63368
Location 3p25.1  [Link to chromosome band 3p25]
Location_base_pair Starts at 13974553 and ends at 13978444 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FGD5P1   44498
Cards
Entrez_Gene (NCBI)FGD5P1  100132526  FYVE, RhoGEF and PH domain containing 5 pseudogene 1
Aliases
GeneCards (Weizmann)FGD5P1
Ensembl hg19 (Hinxton)ENSG00000275340 [Gene_View]  chr3:13974553-13978444 [Contig_View]  FGD5P1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000275340 [Gene_View]  chr3:13974553-13978444 [Contig_View]  FGD5P1 [Vega]
ICGC DataPortalENSG00000275340
TCGA cBioPortalFGD5P1
AceView (NCBI)FGD5P1
Genatlas (Paris)FGD5P1
WikiGenes100132526
SOURCE (Princeton)FGD5P1
Genetics Home Reference (NIH)FGD5P1
Genomic and cartography
GoldenPath hg19 (UCSC)FGD5P1  -     chr3:13974553-13978444 +  3p25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FGD5P1  -     3p25.1   [Description]    (hg38-Dec_2013)
EnsemblFGD5P1 - 3p25.1 [CytoView hg19]  FGD5P1 - 3p25.1 [CytoView hg38]
Mapping of homologs : NCBIFGD5P1 [Mapview hg19]  FGD5P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056482
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929309
Consensus coding sequences : CCDS (NCBI)FGD5P1
Cluster EST : UnigeneHs.637770 [ NCBI ]
CGAP (NCI)Hs.637770
Alternative Splicing GalleryENSG00000275340
Gene ExpressionFGD5P1 [ NCBI-GEO ]   FGD5P1 [ EBI - ARRAY_EXPRESS ]   FGD5P1 [ SEEK ]   FGD5P1 [ MEM ]
Gene Expression Viewer (FireBrowse)FGD5P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132526
GTEX Portal (Tissue expression)FGD5P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FGD5P1
DMDM Disease mutations100132526
Blocks (Seattle)FGD5P1
Human Protein AtlasENSG00000275340
Protein Interaction databases
FunCoupENSG00000275340
BioGRIDFGD5P1
STRING (EMBL)FGD5P1
ZODIACFGD5P1
Ontologies - Pathways
Huge Navigator FGD5P1 [HugePedia]
snp3D : Map Gene to Disease100132526
BioCentury BCIQFGD5P1
ClinGenFGD5P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132526
Clinical trialFGD5P1
Miscellaneous
canSAR (ICR)FGD5P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFGD5P1
EVEXFGD5P1
GoPubMedFGD5P1
iHOPFGD5P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:43 CET 2017

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