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FGF3 (fibroblast growth factor 3)

Identity

Other namesHBGF-3
INT2
HGNC (Hugo) FGF3
LocusID (NCBI) 2248
Location 11q13.3
Location_base_pair Starts at 69624736 and ends at 69634192 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)FGF3   3681
Entrez_Gene (NCBI)FGF3  2248  fibroblast growth factor 3
Cards
GeneCards (Weizmann)FGF3
Ensembl (Hinxton)ENSG00000186895 [Gene_View]  chr11:69624736-69634192 [Contig_View]  FGF3 [Vega]
AceView (NCBI)FGF3
Genatlas (Paris)FGF3
SOURCE (Stanford)NM_005247
Genomic and cartography
GoldenPath (UCSC)FGF3  -  11q13.3   chr11:69624736-69634192 -  11q13.3   [Description]    (hg19-Feb_2009)
EnsemblFGF3 - 11q13.3 [CytoView]
Mapping of homologs : NCBIFGF3 [Mapview]
OMIM164950   610706   
Gene and transcription
Genbank (Entrez)BC113739
RefSeq transcript (SRS)NM_005247
RefSeq transcript (Entrez)NM_005247
RefSeq genomic (SRS)AC_000143 NC_000011 NC_018922 NG_009016 NT_167190 NW_001838027 NW_003571046 NW_004078072
RefSeq genomic (Entrez)AC_000143 NC_000011 NC_018922 NG_009016 NT_167190 NW_001838027 NW_003571046 NW_004078072
Consensus coding sequences : CCDS (NCBI)FGF3
Cluster EST : UnigeneHs.37092 [ SRS ] Hs.37092 [ NCBI ]
CGAP (NCI)Hs.37092
Alternative Splicing : Fast-db (Paris)GSHG0005976
Alternative Splicing GalleryENSG00000186895
Gene ExpressionFGF3 [ NCBI-GEO ]   FGF3 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP11487 (SRS) P11487 (Uniprot)
NextProtP11487
With graphics : InterProP11487
Splice isoforms : SwissVarP11487(Swissvar)
Domaine pattern : Prosite (SRS)HBGF_FGF (PS00247)   
Domaine pattern : Prosite (Expaxy)HBGF_FGF (PS00247)   
Domains : Interpro (SRS)Cytokine_IL1-like    GF_heparin-bd    IL1_HBGF   
Domains : Interpro (EBI)Cytokine_IL1-like    GF_heparin-bd    IL1_HBGF   
Related proteins : CluSTrP11487
Domain families : Pfam (SRS)FGF (PF00167)   
Domain families : Pfam (Sanger)FGF (PF00167)   
Domain families : Pfam (NCBI)pfam00167   
Domain families : Smart (EMBL)FGF (SM00442)  
DMDM2248
Blocks (Seattle)P11487
Human Protein AtlasENSG00000186895
HPRD01289
IPIIPI00005729   
Protein Interaction databases
DIP (DOE-UCLA)P11487
IntAct (EBI)P11487
FunCoupENSG00000186895
REACTOMEFGF3
Protein Interaction Database2248
BioGRIDFGF3
InParanoidP11487
Interologous Interaction database P11487
IntegromeDBFGF3
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)FGF3
SNP (GeneSNP Utah)FGF3
SNP : HGBaseFGF3
Genetic variants : HAPMAPFGF3
Somatic Mutations in Cancer : COSMICFGF3 
CONAN: Copy Number AnalysisFGF3 
Mutations and Diseases : HGMDFGF3
OMIM164950    610706   
GENETests164950    610706   
Disease Genetic AssociationFGF3
Huge Navigator FGF3 [HugePedia]  FGF3 [HugeCancerGEM]
Genomic VariantsFGF3  FGF3 [DGVbeta]
snp3D : Map Gene to Disease2248
General knowledge
Homologs : HomoloGeneFGF3
Homology/Alignments : Family Browser (UCSC)FGF3
Phylogenetic Trees/Animal Genes : TreeFamFGF3
Chemical/Protein Interactions : CTD2248
Chemical/Pharm GKB GenePA28120
Clinical trialFGF3
Cancer Resource (Charite)ENSG00000186895
Ontology : AmiGOorgan induction  protein binding  extracellular region  Golgi apparatus  signal transduction  cell-cell signaling  growth factor activity  positive regulation of cell proliferation  insulin receptor signaling pathway  fibroblast growth factor receptor signaling pathway  fibroblast growth factor receptor signaling pathway  anatomical structure morphogenesis  otic vesicle formation  thymus development  semicircular canal morphogenesis  positive regulation of cell division  negative regulation of cardiac muscle tissue development  
Ontology : EGO-EBIorgan induction  protein binding  extracellular region  Golgi apparatus  signal transduction  cell-cell signaling  growth factor activity  positive regulation of cell proliferation  insulin receptor signaling pathway  fibroblast growth factor receptor signaling pathway  fibroblast growth factor receptor signaling pathway  anatomical structure morphogenesis  otic vesicle formation  thymus development  semicircular canal morphogenesis  positive regulation of cell division  negative regulation of cardiac muscle tissue development  
Pathways : KEGGRegulation of actin cytoskeletonMAPK signaling pathway
Other databases
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
PubGeneFGF3
iHOPFGF3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:44:18 CEST 2013
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