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FGF7P6 (fibroblast growth factor 7 pseudogene 6)

Identity

Other aliasKGFLP1
HGNC (Hugo) FGF7P6
LocusID (NCBI) 387628
Atlas_Id 78787
Location 9q13  [Link to chromosome band 9q13]
Location_base_pair Starts at 62376161 and ends at 62435199 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FGF7P6   27852
Cards
Entrez_Gene (NCBI)FGF7P6  387628  fibroblast growth factor 7 pseudogene 6
AliasesKGFLP1
GeneCards (Weizmann)FGF7P6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:62376161-62435199 [Contig_View]  FGF7P6 [Vega]
TCGA cBioPortalFGF7P6
AceView (NCBI)FGF7P6
Genatlas (Paris)FGF7P6
WikiGenes387628
SOURCE (Princeton)FGF7P6
Genetics Home Reference (NIH)FGF7P6
Genomic and cartography
GoldenPath hg38 (UCSC)FGF7P6  -     chr9:62376161-62435199 +  9q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FGF7P6  -     9q13   [Description]    (hg19-Feb_2009)
EnsemblFGF7P6 - 9q13 [CytoView hg19]  FGF7P6 - 9q13 [CytoView hg38]
Mapping of homologs : NCBIFGF7P6 [Mapview hg19]  FGF7P6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF523265 AK054997 AK307215 AY098593 BC101842
RefSeq transcript (Entrez)NM_174950
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FGF7P6
Cluster EST : UnigeneHs.732660 [ NCBI ]
CGAP (NCI)Hs.732660
Gene ExpressionFGF7P6 [ NCBI-GEO ]   FGF7P6 [ EBI - ARRAY_EXPRESS ]   FGF7P6 [ SEEK ]   FGF7P6 [ MEM ]
Gene Expression Viewer (FireBrowse)FGF7P6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)387628
GTEX Portal (Tissue expression)FGF7P6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NFD4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NFD4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NFD4
Splice isoforms : SwissVarQ8NFD4
PhosPhoSitePlusQ8NFD4
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FGF7P6
DMDM Disease mutations387628
Blocks (Seattle)FGF7P6
SuperfamilyQ8NFD4
Peptide AtlasQ8NFD4
HPRD13402
IPIIPI00887858   IPI00168820   
Protein Interaction databases
DIP (DOE-UCLA)Q8NFD4
IntAct (EBI)Q8NFD4
BioGRIDFGF7P6
STRING (EMBL)FGF7P6
ZODIACFGF7P6
Ontologies - Pathways
QuickGOQ8NFD4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFGF7P6
Atlas of Cancer Signalling NetworkFGF7P6
Wikipedia pathwaysFGF7P6
Orthology - Evolution
OrthoDB387628
Phylogenetic Trees/Animal Genes : TreeFamFGF7P6
HOVERGENQ8NFD4
HOGENOMQ8NFD4
Homologs : HomoloGeneFGF7P6
Homology/Alignments : Family Browser (UCSC)FGF7P6
Gene fusions - Rearrangements
Tumor Fusion PortalFGF7P6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFGF7P6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FGF7P6
dbVarFGF7P6
ClinVarFGF7P6
1000_GenomesFGF7P6 
Exome Variant ServerFGF7P6
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP387628
Genomic Variants (DGV)FGF7P6 [DGVbeta]
DECIPHERFGF7P6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFGF7P6 
Mutations
ICGC Data PortalFGF7P6 
TCGA Data PortalFGF7P6 
Broad Tumor PortalFGF7P6
OASIS PortalFGF7P6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFGF7P6
BioMutasearch FGF7P6
DgiDB (Drug Gene Interaction Database)FGF7P6
DoCM (Curated mutations)FGF7P6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FGF7P6 (select a term)
intoGenFGF7P6
Cancer3DFGF7P6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFGF7P6
MedgenFGF7P6
Genetic Testing Registry FGF7P6
NextProtQ8NFD4 [Medical]
TSGene387628
GENETestsFGF7P6
Target ValidationFGF7P6
Huge Navigator FGF7P6 [HugePedia]
snp3D : Map Gene to Disease387628
BioCentury BCIQFGF7P6
ClinGenFGF7P6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD387628
Clinical trialFGF7P6
Miscellaneous
canSAR (ICR)FGF7P6 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFGF7P6
EVEXFGF7P6
GoPubMedFGF7P6
iHOPFGF7P6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:29:48 CET 2017

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