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FGFBP2 (fibroblast growth factor binding protein 2)

Identity

Alias_symbol (synonym)KSP37
Other aliasHBP17RP
HGNC (Hugo) FGFBP2
LocusID (NCBI) 83888
Atlas_Id 63376
Location 4p15.32  [Link to chromosome band 4p15]
Location_base_pair Starts at 15961863 and ends at 15964859 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FGFBP2   29451
Cards
Entrez_Gene (NCBI)FGFBP2  83888  fibroblast growth factor binding protein 2
AliasesHBP17RP; KSP37
GeneCards (Weizmann)FGFBP2
Ensembl hg19 (Hinxton)ENSG00000137441 [Gene_View]  chr4:15961863-15964859 [Contig_View]  FGFBP2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000137441 [Gene_View]  chr4:15961863-15964859 [Contig_View]  FGFBP2 [Vega]
ICGC DataPortalENSG00000137441
TCGA cBioPortalFGFBP2
AceView (NCBI)FGFBP2
Genatlas (Paris)FGFBP2
WikiGenes83888
SOURCE (Princeton)FGFBP2
Genetics Home Reference (NIH)FGFBP2
Genomic and cartography
GoldenPath hg19 (UCSC)FGFBP2  -     chr4:15961863-15964859 -  4p15.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FGFBP2  -     4p15.32   [Description]    (hg38-Dec_2013)
EnsemblFGFBP2 - 4p15.32 [CytoView hg19]  FGFBP2 - 4p15.32 [CytoView hg38]
Mapping of homologs : NCBIFGFBP2 [Mapview hg19]  FGFBP2 [Mapview hg38]
OMIM607713   
Gene and transcription
Genbank (Entrez)AB021123 AF361936 AY358978 BC025720 CN480296
RefSeq transcript (Entrez)NM_031950
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_006316 NW_004929315
Consensus coding sequences : CCDS (NCBI)FGFBP2
Cluster EST : UnigeneHs.98785 [ NCBI ]
CGAP (NCI)Hs.98785
Alternative Splicing GalleryENSG00000137441
Gene ExpressionFGFBP2 [ NCBI-GEO ]   FGFBP2 [ EBI - ARRAY_EXPRESS ]   FGFBP2 [ SEEK ]   FGFBP2 [ MEM ]
Gene Expression Viewer (FireBrowse)FGFBP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83888
GTEX Portal (Tissue expression)FGFBP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BYJ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BYJ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BYJ0
Splice isoforms : SwissVarQ9BYJ0
PhosPhoSitePlusQ9BYJ0
Domains : Interpro (EBI)FGF1-bd   
Domain families : Pfam (Sanger)FGF-BP1 (PF06473)   
Domain families : Pfam (NCBI)pfam06473   
Conserved Domain (NCBI)FGFBP2
DMDM Disease mutations83888
Blocks (Seattle)FGFBP2
SuperfamilyQ9BYJ0
Human Protein AtlasENSG00000137441
Peptide AtlasQ9BYJ0
HPRD07413
IPIIPI00011194   
Protein Interaction databases
DIP (DOE-UCLA)Q9BYJ0
IntAct (EBI)Q9BYJ0
FunCoupENSG00000137441
BioGRIDFGFBP2
STRING (EMBL)FGFBP2
ZODIACFGFBP2
Ontologies - Pathways
QuickGOQ9BYJ0
Ontology : AmiGOextracellular space  growth factor binding  
Ontology : EGO-EBIextracellular space  growth factor binding  
NDEx NetworkFGFBP2
Atlas of Cancer Signalling NetworkFGFBP2
Wikipedia pathwaysFGFBP2
Orthology - Evolution
OrthoDB83888
GeneTree (enSembl)ENSG00000137441
Phylogenetic Trees/Animal Genes : TreeFamFGFBP2
HOVERGENQ9BYJ0
HOGENOMQ9BYJ0
Homologs : HomoloGeneFGFBP2
Homology/Alignments : Family Browser (UCSC)FGFBP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFGFBP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FGFBP2
dbVarFGFBP2
ClinVarFGFBP2
1000_GenomesFGFBP2 
Exome Variant ServerFGFBP2
ExAC (Exome Aggregation Consortium)FGFBP2 (select the gene name)
Genetic variants : HAPMAP83888
Genomic Variants (DGV)FGFBP2 [DGVbeta]
DECIPHER (Syndromes)4:15961863-15964859  ENSG00000137441
CONAN: Copy Number AnalysisFGFBP2 
Mutations
ICGC Data PortalFGFBP2 
TCGA Data PortalFGFBP2 
Broad Tumor PortalFGFBP2
OASIS PortalFGFBP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFGFBP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFGFBP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FGFBP2
DgiDB (Drug Gene Interaction Database)FGFBP2
DoCM (Curated mutations)FGFBP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FGFBP2 (select a term)
intoGenFGFBP2
Cancer3DFGFBP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607713   
Orphanet
MedgenFGFBP2
Genetic Testing Registry FGFBP2
NextProtQ9BYJ0 [Medical]
TSGene83888
GENETestsFGFBP2
Huge Navigator FGFBP2 [HugePedia]
snp3D : Map Gene to Disease83888
BioCentury BCIQFGFBP2
ClinGenFGFBP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83888
Chemical/Pharm GKB GenePA162388435
Clinical trialFGFBP2
Miscellaneous
canSAR (ICR)FGFBP2 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFGFBP2
EVEXFGFBP2
GoPubMedFGFBP2
iHOPFGFBP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:04:46 CET 2017

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