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FGL2 (fibrinogen like 2)

Identity

Alias_namesfibrinogen-like 2
Alias_symbol (synonym)pT49
T49
Other alias
HGNC (Hugo) FGL2
LocusID (NCBI) 10875
Atlas_Id 50707
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 77193371 and ends at 77199833 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FGL2   3696
Cards
Entrez_Gene (NCBI)FGL2  10875  fibrinogen like 2
AliasesT49; pT49
GeneCards (Weizmann)FGL2
Ensembl hg19 (Hinxton)ENSG00000127951 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000127951 [Gene_View]  chr7:77193371-77199833 [Contig_View]  FGL2 [Vega]
ICGC DataPortalENSG00000127951
TCGA cBioPortalFGL2
AceView (NCBI)FGL2
Genatlas (Paris)FGL2
WikiGenes10875
SOURCE (Princeton)FGL2
Genetics Home Reference (NIH)FGL2
Genomic and cartography
GoldenPath hg38 (UCSC)FGL2  -     chr7:77193371-77199833 -  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FGL2  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblFGL2 - 7q11.23 [CytoView hg19]  FGL2 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBIFGL2 [Mapview hg19]  FGL2 [Mapview hg38]
OMIM605351   
Gene and transcription
Genbank (Entrez)AK222999 AK310921 AK312672 BC017813 BC033820
RefSeq transcript (Entrez)NM_006682
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FGL2
Cluster EST : UnigeneHs.520989 [ NCBI ]
CGAP (NCI)Hs.520989
Alternative Splicing GalleryENSG00000127951
Gene ExpressionFGL2 [ NCBI-GEO ]   FGL2 [ EBI - ARRAY_EXPRESS ]   FGL2 [ SEEK ]   FGL2 [ MEM ]
Gene Expression Viewer (FireBrowse)FGL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10875
GTEX Portal (Tissue expression)FGL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14314   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14314  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14314
Splice isoforms : SwissVarQ14314
PhosPhoSitePlusQ14314
Domaine pattern : Prosite (Expaxy)FIBRINOGEN_C_1 (PS00514)    FIBRINOGEN_C_2 (PS51406)   
Domains : Interpro (EBI)Fgl2    Fibrinogen_a/b/g_C_1    Fibrinogen_a/b/g_C_2    Fibrinogen_a/b/g_C_dom    Fibrinogen_CS   
Domain families : Pfam (Sanger)Fibrinogen_C (PF00147)   
Domain families : Pfam (NCBI)pfam00147   
Domain families : Smart (EMBL)FBG (SM00186)  
Conserved Domain (NCBI)FGL2
DMDM Disease mutations10875
Blocks (Seattle)FGL2
SuperfamilyQ14314
Human Protein AtlasENSG00000127951
Peptide AtlasQ14314
HPRD16098
IPIIPI00030075   
Protein Interaction databases
DIP (DOE-UCLA)Q14314
IntAct (EBI)Q14314
FunCoupENSG00000127951
BioGRIDFGL2
STRING (EMBL)FGL2
ZODIACFGL2
Ontologies - Pathways
QuickGOQ14314
Ontology : AmiGOextracellular region  fibrinogen complex  proteolysis  peptidase activity  neutrophil degranulation  extracellular exosome  ficolin-1-rich granule lumen  
Ontology : EGO-EBIextracellular region  fibrinogen complex  proteolysis  peptidase activity  neutrophil degranulation  extracellular exosome  ficolin-1-rich granule lumen  
NDEx NetworkFGL2
Atlas of Cancer Signalling NetworkFGL2
Wikipedia pathwaysFGL2
Orthology - Evolution
OrthoDB10875
GeneTree (enSembl)ENSG00000127951
Phylogenetic Trees/Animal Genes : TreeFamFGL2
HOVERGENQ14314
HOGENOMQ14314
Homologs : HomoloGeneFGL2
Homology/Alignments : Family Browser (UCSC)FGL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFGL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FGL2
dbVarFGL2
ClinVarFGL2
1000_GenomesFGL2 
Exome Variant ServerFGL2
ExAC (Exome Aggregation Consortium)FGL2 (select the gene name)
Genetic variants : HAPMAP10875
Genomic Variants (DGV)FGL2 [DGVbeta]
DECIPHERFGL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFGL2 
Mutations
ICGC Data PortalFGL2 
TCGA Data PortalFGL2 
Broad Tumor PortalFGL2
OASIS PortalFGL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFGL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFGL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FGL2
DgiDB (Drug Gene Interaction Database)FGL2
DoCM (Curated mutations)FGL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FGL2 (select a term)
intoGenFGL2
Cancer3DFGL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605351   
Orphanet
MedgenFGL2
Genetic Testing Registry FGL2
NextProtQ14314 [Medical]
TSGene10875
GENETestsFGL2
Huge Navigator FGL2 [HugePedia]
snp3D : Map Gene to Disease10875
BioCentury BCIQFGL2
ClinGenFGL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10875
Chemical/Pharm GKB GenePA28134
Clinical trialFGL2
Miscellaneous
canSAR (ICR)FGL2 (select the gene name)
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFGL2
EVEXFGL2
GoPubMedFGL2
iHOPFGL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:16:01 CEST 2017

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