Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FHL1 (four and a half LIM domains 1)

Identity

Alias (NCBI)FCMSU
FHL-1
FHL1A
FHL1B
FLH1A
KYOT
RBMX1A
RBMX1B
SLIM
SLIM-1
SLIM1
SLIMMER
XMPMA
HGNC (Hugo) FHL1
HGNC Alias symbSLIM1
KYO-T
bA535K18.1
FHL1B
XMPMA
FLH1A
MGC111107
HGNC Alias nameFour-and-a-half LIM domains 1
 LIM protein SLIMMER
LocusID (NCBI) 2273
Atlas_Id 45582
Location Xq26.3  [Link to chromosome band Xq26]
Location_base_pair Starts at 136147533 and ends at 136211354 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BTG3 (21q21.1) / FHL1 (Xq26.3)CTSL (9q21.33) / FHL1 (Xq26.3)FHL1 (Xq26.3) / COX6C (8q22.2)
FHL1 (Xq26.3) / SGCA (17q21.33)PHB2 (12p13.31) / FHL1 (Xq26.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)FHL1   3702
LRG (Locus Reference Genomic)LRG_739
Cards
Entrez_Gene (NCBI)FHL1    four and a half LIM domains 1
AliasesFCMSU; FHL-1; FHL1A; FHL1B; 
FLH1A; KYOT; RBMX1A; RBMX1B; SLIM; SLIM-1; SLIM1; SLIMMER; XMPMA
GeneCards (Weizmann)FHL1
Ensembl hg19 (Hinxton)ENSG00000022267 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000022267 [Gene_View]  ENSG00000022267 [Sequence]  chrX:136147533-136211354 [Contig_View]  FHL1 [Vega]
ICGC DataPortalENSG00000022267
TCGA cBioPortalFHL1
AceView (NCBI)FHL1
Genatlas (Paris)FHL1
SOURCE (Princeton)FHL1
Genetics Home Reference (NIH)FHL1
Genomic and cartography
GoldenPath hg38 (UCSC)FHL1  -     chrX:136147533-136211354 +  Xq26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FHL1  -     Xq26.3   [Description]    (hg19-Feb_2009)
GoldenPathFHL1 - Xq26.3 [CytoView hg19]  FHL1 - Xq26.3 [CytoView hg38]
ImmunoBaseENSG00000022267
genome Data Viewer NCBIFHL1 [Mapview hg19]  
OMIM300163   300280   300695   300696   300717   300718   
Gene and transcription
Genbank (Entrez)AF063002 AF098518 AF220153 AK091702 AK094024
RefSeq transcript (Entrez)NM_001159699 NM_001159700 NM_001159701 NM_001159702 NM_001159703 NM_001159704 NM_001167819 NM_001330659 NM_001369326 NM_001369327 NM_001369328 NM_001369329 NM_001369330 NM_001369331 NM_001449
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FHL1
Alternative Splicing GalleryENSG00000022267
Gene ExpressionFHL1 [ NCBI-GEO ]   FHL1 [ EBI - ARRAY_EXPRESS ]   FHL1 [ SEEK ]   FHL1 [ MEM ]
Gene Expression Viewer (FireBrowse)FHL1 [ Firebrowse - Broad ]
GenevisibleExpression of FHL1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2273
GTEX Portal (Tissue expression)FHL1
Human Protein AtlasENSG00000022267-FHL1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FHL1
Blocks (Seattle)FHL1
Human Protein Atlas [tissue]ENSG00000022267-FHL1 [tissue]
HPRD02157
IPIIPI00647207   IPI00055606   IPI00922730   IPI00922769   IPI00902610   IPI00930706   IPI00029028   IPI00014398   IPI00645286   IPI00643324   IPI00644118   IPI00644668   IPI00641404   IPI00639828   
Protein Interaction databases
BioGRIDFHL1
STRING (EMBL)FHL1
ZODIACFHL1
Ontologies - Pathways
Litterature
PubMed125 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFHL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:21:37 CET 2021

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