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FHOD3 (formin homology 2 domain containing 3)

Identity

Alias_symbol (synonym)FHOS2
KIAA1695
FLJ22297
FLJ22717
Other aliasFormactin2
HGNC (Hugo) FHOD3
LocusID (NCBI) 80206
Atlas_Id 50968
Location 18q12.2  [Link to chromosome band 18q12]
Location_base_pair Starts at 36297696 and ends at 36780220 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FHOD3 (18q12.2) / FHOD3 (18q12.2)FHOD3 (18q12.2) / MOCOS (18q12.2)FHOD3 (18q12.2) / MS4A15 (11q12.2)
FHOD3 (18q12.2) / MYOM1 (18p11.31)FHOD3 (18q12.2) / SLC25A4 (4q35.1)PTMS (12p13.31) / FHOD3 (18q12.2)
FHOD3 18q12.2 / MOCOS 18q12.2FHOD3 18q12.2 / MS4A15 11q12.2FHOD3 18q12.2 / MYOM1 18p11.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FHOD3   26178
Cards
Entrez_Gene (NCBI)FHOD3  80206  formin homology 2 domain containing 3
AliasesFHOS2; Formactin2
GeneCards (Weizmann)FHOD3
Ensembl hg19 (Hinxton)ENSG00000134775 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134775 [Gene_View]  chr18:36297696-36780220 [Contig_View]  FHOD3 [Vega]
ICGC DataPortalENSG00000134775
TCGA cBioPortalFHOD3
AceView (NCBI)FHOD3
Genatlas (Paris)FHOD3
WikiGenes80206
SOURCE (Princeton)FHOD3
Genetics Home Reference (NIH)FHOD3
Genomic and cartography
GoldenPath hg38 (UCSC)FHOD3  -     chr18:36297696-36780220 +  18q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FHOD3  -     18q12.2   [Description]    (hg19-Feb_2009)
EnsemblFHOD3 - 18q12.2 [CytoView hg19]  FHOD3 - 18q12.2 [CytoView hg38]
Mapping of homologs : NCBIFHOD3 [Mapview hg19]  FHOD3 [Mapview hg38]
OMIM609691   
Gene and transcription
Genbank (Entrez)AB051482 AB084087 AI948493 AK025950 AK026370
RefSeq transcript (Entrez)NM_001281739 NM_001281740 NM_025135
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FHOD3
Cluster EST : UnigeneHs.630884 [ NCBI ]
CGAP (NCI)Hs.630884
Alternative Splicing GalleryENSG00000134775
Gene ExpressionFHOD3 [ NCBI-GEO ]   FHOD3 [ EBI - ARRAY_EXPRESS ]   FHOD3 [ SEEK ]   FHOD3 [ MEM ]
Gene Expression Viewer (FireBrowse)FHOD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80206
GTEX Portal (Tissue expression)FHOD3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2V2M9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2V2M9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2V2M9
Splice isoforms : SwissVarQ2V2M9
PhosPhoSitePlusQ2V2M9
Domaine pattern : Prosite (Expaxy)DAD (PS51231)    FH2 (PS51444)    GBD_FH3 (PS51232)   
Domains : Interpro (EBI)ARM-type_fold    DAD_dom    FH2_Formin    FHOD3    GBD/FH3_dom   
Domain families : Pfam (Sanger)FH2 (PF02181)   
Domain families : Pfam (NCBI)pfam02181   
Domain families : Smart (EMBL)FH2 (SM00498)  
Conserved Domain (NCBI)FHOD3
DMDM Disease mutations80206
Blocks (Seattle)FHOD3
SuperfamilyQ2V2M9
Human Protein AtlasENSG00000134775
Peptide AtlasQ2V2M9
HPRD16894
IPIIPI00397675   IPI00843844   IPI00939843   IPI00903056   
Protein Interaction databases
DIP (DOE-UCLA)Q2V2M9
IntAct (EBI)Q2V2M9
FunCoupENSG00000134775
BioGRIDFHOD3
STRING (EMBL)FHOD3
ZODIACFHOD3
Ontologies - Pathways
QuickGOQ2V2M9
Ontology : AmiGOactin binding  protein binding  striated muscle thin filament  Z disc  negative regulation of actin filament polymerization  sarcomere organization  actin filament network formation  cardiac myofibril assembly  
Ontology : EGO-EBIactin binding  protein binding  striated muscle thin filament  Z disc  negative regulation of actin filament polymerization  sarcomere organization  actin filament network formation  cardiac myofibril assembly  
NDEx NetworkFHOD3
Atlas of Cancer Signalling NetworkFHOD3
Wikipedia pathwaysFHOD3
Orthology - Evolution
OrthoDB80206
GeneTree (enSembl)ENSG00000134775
Phylogenetic Trees/Animal Genes : TreeFamFHOD3
HOVERGENQ2V2M9
HOGENOMQ2V2M9
Homologs : HomoloGeneFHOD3
Homology/Alignments : Family Browser (UCSC)FHOD3
Gene fusions - Rearrangements
Fusion : MitelmanFHOD3/MOCOS [18q12.2/18q12.2]  
Fusion : MitelmanFHOD3/MS4A15 [18q12.2/11q12.2]  [t(11;18)(q12;q12)]  
Fusion : MitelmanFHOD3/MYOM1 [18q12.2/18p11.31]  [t(18;18)(p11;q12)]  
Fusion: TCGAFHOD3 18q12.2 MOCOS 18q12.2 HNSC
Fusion: TCGAFHOD3 18q12.2 MS4A15 11q12.2 HNSC
Fusion: TCGAFHOD3 18q12.2 MYOM1 18p11.31 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFHOD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FHOD3
dbVarFHOD3
ClinVarFHOD3
1000_GenomesFHOD3 
Exome Variant ServerFHOD3
ExAC (Exome Aggregation Consortium)FHOD3 (select the gene name)
Genetic variants : HAPMAP80206
Genomic Variants (DGV)FHOD3 [DGVbeta]
DECIPHERFHOD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFHOD3 
Mutations
ICGC Data PortalFHOD3 
TCGA Data PortalFHOD3 
Broad Tumor PortalFHOD3
OASIS PortalFHOD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFHOD3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFHOD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FHOD3
DgiDB (Drug Gene Interaction Database)FHOD3
DoCM (Curated mutations)FHOD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FHOD3 (select a term)
intoGenFHOD3
Cancer3DFHOD3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609691   
Orphanet
MedgenFHOD3
Genetic Testing Registry FHOD3
NextProtQ2V2M9 [Medical]
TSGene80206
GENETestsFHOD3
Huge Navigator FHOD3 [HugePedia]
snp3D : Map Gene to Disease80206
BioCentury BCIQFHOD3
ClinGenFHOD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80206
Chemical/Pharm GKB GenePA134929910
Clinical trialFHOD3
Miscellaneous
canSAR (ICR)FHOD3 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFHOD3
EVEXFHOD3
GoPubMedFHOD3
iHOPFHOD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:16:03 CEST 2017

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