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FIBP (FGF1 intracellular binding protein)

Identity

Alias (NCBI)FGFIBP
FIBP-1
TROFAS
HGNC (Hugo) FIBP
HGNC Alias symbFGFIBP
HGNC Previous namefibroblast growth factor (acidic) intracellular binding protein
LocusID (NCBI) 9158
Atlas_Id 57258
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65883740 and ends at 65888471 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)FIBP   3705
Cards
Entrez_Gene (NCBI)FIBP    FGF1 intracellular binding protein
AliasesFGFIBP; FIBP-1; TROFAS
GeneCards (Weizmann)FIBP
Ensembl hg19 (Hinxton)ENSG00000172500 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172500 [Gene_View]  ENSG00000172500 [Sequence]  chr11:65883740-65888471 [Contig_View]  FIBP [Vega]
ICGC DataPortalENSG00000172500
TCGA cBioPortalFIBP
AceView (NCBI)FIBP
Genatlas (Paris)FIBP
SOURCE (Princeton)FIBP
Genetics Home Reference (NIH)FIBP
Genomic and cartography
GoldenPath hg38 (UCSC)FIBP  -     chr11:65883740-65888471 -  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FIBP  -     11q13.1   [Description]    (hg19-Feb_2009)
GoldenPathFIBP - 11q13.1 [CytoView hg19]  FIBP - 11q13.1 [CytoView hg38]
ImmunoBaseENSG00000172500
Genome Data Viewer NCBIFIBP [Mapview hg19]  
OMIM608296   617107   
Gene and transcription
Genbank (Entrez)AF010187 AF171944 AF171945 AF171946 AF250391
RefSeq transcript (Entrez)NM_004214 NM_198897
Consensus coding sequences : CCDS (NCBI)FIBP
Gene ExpressionFIBP [ NCBI-GEO ]   FIBP [ EBI - ARRAY_EXPRESS ]   FIBP [ SEEK ]   FIBP [ MEM ]
Gene Expression Viewer (FireBrowse)FIBP [ Firebrowse - Broad ]
GenevisibleExpression of FIBP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9158
GTEX Portal (Tissue expression)FIBP
Human Protein AtlasENSG00000172500-FIBP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43427   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43427  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43427
PhosPhoSitePlusO43427
Domains : Interpro (EBI)FIBP   
Domain families : Pfam (Sanger)FIBP (PF05427)   
Domain families : Pfam (NCBI)pfam05427   
Conserved Domain (NCBI)FIBP
SuperfamilyO43427
AlphaFold pdb e-kbO43427   
Human Protein Atlas [tissue]ENSG00000172500-FIBP [tissue]
Protein Interaction databases
DIP (DOE-UCLA)O43427
IntAct (EBI)O43427
BioGRIDFIBP
STRING (EMBL)FIBP
ZODIACFIBP
Ontologies - Pathways
QuickGOO43427
Ontology : AmiGOnucleus  nucleus  mitochondrion  fibroblast growth factor receptor signaling pathway  endomembrane system  membrane  nuclear speck  fibroblast growth factor binding  fibroblast growth factor binding  platelet aggregation  
Ontology : EGO-EBInucleus  nucleus  mitochondrion  fibroblast growth factor receptor signaling pathway  endomembrane system  membrane  nuclear speck  fibroblast growth factor binding  fibroblast growth factor binding  platelet aggregation  
NDEx NetworkFIBP
Atlas of Cancer Signalling NetworkFIBP
Wikipedia pathwaysFIBP
Orthology - Evolution
OrthoDB9158
GeneTree (enSembl)ENSG00000172500
Phylogenetic Trees/Animal Genes : TreeFamFIBP
Homologs : HomoloGeneFIBP
Homology/Alignments : Family Browser (UCSC)FIBP
Gene fusions - Rearrangements
Fusion : QuiverFIBP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFIBP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FIBP
dbVarFIBP
ClinVarFIBP
MonarchFIBP
1000_GenomesFIBP 
Exome Variant ServerFIBP
GNOMAD BrowserENSG00000172500
Varsome BrowserFIBP
ACMGFIBP variants
VarityO43427
Genomic Variants (DGV)FIBP [DGVbeta]
DECIPHERFIBP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFIBP 
Mutations
ICGC Data PortalFIBP 
TCGA Data PortalFIBP 
Broad Tumor PortalFIBP
OASIS PortalFIBP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFIBP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFIBP
Mutations and Diseases : HGMDFIBP
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFIBP
DgiDB (Drug Gene Interaction Database)FIBP
DoCM (Curated mutations)FIBP
CIViC (Clinical Interpretations of Variants in Cancer)FIBP
Cancer3DFIBP
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608296    617107   
Orphanet
DisGeNETFIBP
MedgenFIBP
Genetic Testing Registry FIBP
NextProtO43427 [Medical]
GENETestsFIBP
Target ValidationFIBP
Huge Navigator FIBP [HugePedia]
ClinGenFIBP
Clinical trials, drugs, therapy
MyCancerGenomeFIBP
Protein Interactions : CTDFIBP
Pharm GKB GenePA28145
PharosO43427
Clinical trialFIBP
Miscellaneous
canSAR (ICR)FIBP
HarmonizomeFIBP
DataMed IndexFIBP
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFIBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:09:31 CEST 2021

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