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FIBP (FGF1 intracellular binding protein)

Identity

Alias_namesfibroblast growth factor (acidic) intracellular binding protein
Alias_symbol (synonym)FGFIBP
Other aliasFIBP-1
TROFAS
HGNC (Hugo) FIBP
LocusID (NCBI) 9158
Atlas_Id 63382
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65883740 and ends at 65888539 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FIBP   3705
Cards
Entrez_Gene (NCBI)FIBP  9158  FGF1 intracellular binding protein
AliasesFGFIBP; FIBP-1; TROFAS
GeneCards (Weizmann)FIBP
Ensembl hg19 (Hinxton)ENSG00000172500 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172500 [Gene_View]  chr11:65883740-65888539 [Contig_View]  FIBP [Vega]
ICGC DataPortalENSG00000172500
TCGA cBioPortalFIBP
AceView (NCBI)FIBP
Genatlas (Paris)FIBP
WikiGenes9158
SOURCE (Princeton)FIBP
Genetics Home Reference (NIH)FIBP
Genomic and cartography
GoldenPath hg38 (UCSC)FIBP  -     chr11:65883740-65888539 -  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FIBP  -     11q13.1   [Description]    (hg19-Feb_2009)
EnsemblFIBP - 11q13.1 [CytoView hg19]  FIBP - 11q13.1 [CytoView hg38]
Mapping of homologs : NCBIFIBP [Mapview hg19]  FIBP [Mapview hg38]
OMIM608296   617107   
Gene and transcription
Genbank (Entrez)AF010187 AF171944 AF171945 AF171946 AF250391
RefSeq transcript (Entrez)NM_004214 NM_198897
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FIBP
Cluster EST : UnigeneHs.7768 [ NCBI ]
CGAP (NCI)Hs.7768
Alternative Splicing GalleryENSG00000172500
Gene ExpressionFIBP [ NCBI-GEO ]   FIBP [ EBI - ARRAY_EXPRESS ]   FIBP [ SEEK ]   FIBP [ MEM ]
Gene Expression Viewer (FireBrowse)FIBP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9158
GTEX Portal (Tissue expression)FIBP
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43427   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43427  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43427
Splice isoforms : SwissVarO43427
PhosPhoSitePlusO43427
Domains : Interpro (EBI)FIBP   
Domain families : Pfam (Sanger)FIBP (PF05427)   
Domain families : Pfam (NCBI)pfam05427   
Conserved Domain (NCBI)FIBP
DMDM Disease mutations9158
Blocks (Seattle)FIBP
SuperfamilyO43427
Human Protein AtlasENSG00000172500
Peptide AtlasO43427
HPRD08492
IPIIPI00012443   IPI00219570   IPI00909089   IPI01008735   IPI00977719   IPI00982920   IPI00908774   
Protein Interaction databases
DIP (DOE-UCLA)O43427
IntAct (EBI)O43427
FunCoupENSG00000172500
BioGRIDFIBP
STRING (EMBL)FIBP
ZODIACFIBP
Ontologies - Pathways
QuickGOO43427
Ontology : AmiGOnucleus  mitochondrion  fibroblast growth factor receptor signaling pathway  endomembrane system  membrane  nuclear speck  fibroblast growth factor binding  extracellular exosome  platelet aggregation  
Ontology : EGO-EBInucleus  mitochondrion  fibroblast growth factor receptor signaling pathway  endomembrane system  membrane  nuclear speck  fibroblast growth factor binding  extracellular exosome  platelet aggregation  
NDEx NetworkFIBP
Atlas of Cancer Signalling NetworkFIBP
Wikipedia pathwaysFIBP
Orthology - Evolution
OrthoDB9158
GeneTree (enSembl)ENSG00000172500
Phylogenetic Trees/Animal Genes : TreeFamFIBP
HOVERGENO43427
HOGENOMO43427
Homologs : HomoloGeneFIBP
Homology/Alignments : Family Browser (UCSC)FIBP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFIBP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FIBP
dbVarFIBP
ClinVarFIBP
1000_GenomesFIBP 
Exome Variant ServerFIBP
ExAC (Exome Aggregation Consortium)FIBP (select the gene name)
Genetic variants : HAPMAP9158
Genomic Variants (DGV)FIBP [DGVbeta]
DECIPHERFIBP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFIBP 
Mutations
ICGC Data PortalFIBP 
TCGA Data PortalFIBP 
Broad Tumor PortalFIBP
OASIS PortalFIBP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFIBP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFIBP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FIBP
DgiDB (Drug Gene Interaction Database)FIBP
DoCM (Curated mutations)FIBP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FIBP (select a term)
intoGenFIBP
Cancer3DFIBP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608296    617107   
Orphanet
MedgenFIBP
Genetic Testing Registry FIBP
NextProtO43427 [Medical]
TSGene9158
GENETestsFIBP
Target ValidationFIBP
Huge Navigator FIBP [HugePedia]
snp3D : Map Gene to Disease9158
BioCentury BCIQFIBP
ClinGenFIBP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9158
Chemical/Pharm GKB GenePA28145
Clinical trialFIBP
Miscellaneous
canSAR (ICR)FIBP (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFIBP
EVEXFIBP
GoPubMedFIBP
iHOPFIBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:49:13 CEST 2017

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