FIGF (c-fos induced growth factor (vascular endothelial growth factor D))

Identity

Other names	VEGF-D
	VEGFD
HGNC	FIGF
Location	Xp22.31
Location_base_pair	Starts at 15273639 and ends at 15312498 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	FIGF   3708
Entrez_Gene	FIGF  2277  c-fos induced growth factor (vascular endothelial growth factor D)
	Cards
GeneCards	FIGF
Ensembl	FIGF [Search_View]   ENSG00000165197 [Gene_View]
Genatlas	FIGF
GeneLynx	FIGF
eGenome	FIGF
euGene	2277
	Genomic and cartography
GoldenPath	FIGF  -  Xp22.31   chrX:15273639-15312498 -  Xp22.2   [Description]    (hg18-March_2006)
Ensembl	FIGF - Xp22.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	FIGF
	Gene and transcription
Genbank	AJ000185 [ ENTREZ ]
Genbank	AK223160 [ ENTREZ ]
Genbank	AK313173 [ ENTREZ ]
Genbank	BC027948 [ ENTREZ ]
Genbank	D89630 [ ENTREZ ]
RefSeq	NM_004469 [ SRS ]    NM_004469 [ ENTREZ ]
RefSeq	AC_000066 [ SRS ]    AC_000066 [ ENTREZ ]
RefSeq	AC_000155 [ SRS ]    AC_000155 [ ENTREZ ]
RefSeq	NC_000023 [ SRS ]    NC_000023 [ ENTREZ ]
RefSeq	NT_011757 [ SRS ]    NT_011757 [ ENTREZ ]
RefSeq	NW_001842360 [ SRS ]    NW_001842360 [ ENTREZ ]
RefSeq	NW_927700 [ SRS ]    NW_927700 [ ENTREZ ]
AceView	FIGF AceView - NCBI
Unigene	Hs.11392 [ SRS ]    Hs.11392 [ NCBI ]     HS11392 [ spliceNest ]
Fast-db	2250 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O43915 [ SRS]    O43915 [ EXPASY ]     O43915 [ INTERPRO ]     O43915 [ UNIPROT ]
Prosite	PS00249 PDGF_1 [ SRS ]    PS00249 PDGF_1 [ Expasy ]
Prosite	PS50278 PDGF_2 [ SRS ]    PS50278 PDGF_2 [ Expasy ]
Interpro	IPR000072 PD_growth_factor [ SRS ]    IPR000072 PD_growth_factor [ EBI ]
CluSTr	O43915
Pfam	PF00341 PDGF [ SRS ]    PF00341 PDGF [ Sanger ]    pfam00341 [ NCBI-CDD ]
Smart	SM00141 PDGF [EMBL]
Prodom	PD001629 PD_growth_factor[INRA-Toulouse]
Prodom	O43915 VEGFD_HUMAN [ Domain structure ]   O43915 VEGFD_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	O43915
HPRD	02102
	Protein Interaction databases
DIP	O43915
IntAct	O43915
	Polymorphism : SNP, mutations, diseases
OMIM	300091    [ map ]
GENECLINICS	300091
SNP	FIGF [dbSNP-NCBI]
SNP	NM_004469 [SNP-NCI]
SNP	FIGF [GeneSNPs - Utah]  FIGF] [HGBASE - SRS]
HAPMAP	FIGF [HAPMAP]
COSMIC	FIGF [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	FIGF
	General knowledge
Family Browser	FIGF [UCSC Family Browser]
SOURCE	NM_004469
SMD	Hs.11392
SAGE	Hs.11392
GO	angiogenesis [Amigo]  angiogenesis
GO	platelet-derived growth factor receptor binding [Amigo]  platelet-derived growth factor receptor binding
GO	extracellular region [Amigo]  extracellular region
GO	extracellular region [Amigo]  extracellular region
GO	extracellular space [Amigo]  extracellular space
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	growth factor activity [Amigo]  growth factor activity
GO	positive regulation of cell proliferation [Amigo]  positive regulation of cell proliferation
GO	membrane [Amigo]  membrane
GO	cell differentiation [Amigo]  cell differentiation
GO	platelet alpha granule lumen [Amigo]  platelet alpha granule lumen
GO	protein homodimerization activity [Amigo]  protein homodimerization activity
GO	vascular endothelial growth factor receptor 3 binding [Amigo]  vascular endothelial growth factor receptor 3 binding
GO	vascular endothelial growth factor receptor signaling pathway [Amigo]  vascular endothelial growth factor receptor signaling pathway
KEGG	mTOR signaling pathway
KEGG	Focal adhesion
PubGene	FIGF
TreeFam	FIGF
CTD	2277 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FIGF Related clones (RZPD - Berlin)
	PubMed
PubMed	38 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:41:38 2008