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FILNC1 (FOXO induced long non-coding RNA 1)

Identity

Other alias-
HGNC (Hugo) FILNC1
LocusID (NCBI) 100132735
Atlas_Id 57070
Location 6q24.1  [Link to chromosome band 6q24]
Location_base_pair Starts at 139854850 and ends at 139860471 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)FILNC1   53755
Cards
Entrez_Gene (NCBI)FILNC1  100132735  FOXO induced long non-coding RNA 1
Aliases
GeneCards (Weizmann)FILNC1
Ensembl hg19 (Hinxton)ENSG00000231426 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000231426 [Gene_View]  ENSG00000231426 [Sequence]  chr6:139854850-139860471 [Contig_View]  FILNC1 [Vega]
ICGC DataPortalENSG00000231426
TCGA cBioPortalFILNC1
AceView (NCBI)FILNC1
Genatlas (Paris)FILNC1
WikiGenes100132735
SOURCE (Princeton)FILNC1
Genetics Home Reference (NIH)FILNC1
Genomic and cartography
GoldenPath hg38 (UCSC)FILNC1  -     chr6:139854850-139860471 +  6q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FILNC1  -     6q24.1   [Description]    (hg19-Feb_2009)
EnsemblFILNC1 - 6q24.1 [CytoView hg19]  FILNC1 - 6q24.1 [CytoView hg38]
Mapping of homologs : NCBIFILNC1 [Mapview hg19]  FILNC1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA058905 BM788274 BM905115
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FILNC1
Cluster EST : UnigeneHs.62646 [ NCBI ]
CGAP (NCI)Hs.62646
Alternative Splicing GalleryENSG00000231426
Gene ExpressionFILNC1 [ NCBI-GEO ]   FILNC1 [ EBI - ARRAY_EXPRESS ]   FILNC1 [ SEEK ]   FILNC1 [ MEM ]
Gene Expression Viewer (FireBrowse)FILNC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100132735
GTEX Portal (Tissue expression)FILNC1
Human Protein AtlasENSG00000231426-FILNC1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FILNC1
DMDM Disease mutations100132735
Blocks (Seattle)FILNC1
Human Protein Atlas [tissue]ENSG00000231426-FILNC1 [tissue]
Protein Interaction databases
FunCoupENSG00000231426
BioGRIDFILNC1
STRING (EMBL)FILNC1
ZODIACFILNC1
Ontologies - Pathways
Huge Navigator FILNC1 [HugePedia]
snp3D : Map Gene to Disease100132735
BioCentury BCIQFILNC1
ClinGenFILNC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100132735
Clinical trialFILNC1
Miscellaneous
canSAR (ICR)FILNC1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFILNC1
EVEXFILNC1
GoPubMedFILNC1
iHOPFILNC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:06:42 CET 2018

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