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FIZ1 (FLT3 interacting zinc finger 1)

Identity

Alias_symbol (synonym)FLJ14768
ZNF798
Other alias
HGNC (Hugo) FIZ1
LocusID (NCBI) 84922
Atlas_Id 56150
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 56102737 and ends at 56110893 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ADAM10 (15q21.3) / FIZ1 (19q13.42)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FIZ1   25917
Cards
Entrez_Gene (NCBI)FIZ1  84922  FLT3 interacting zinc finger 1
AliasesZNF798
GeneCards (Weizmann)FIZ1
Ensembl hg19 (Hinxton)ENSG00000179943 [Gene_View]  chr19:56102737-56110893 [Contig_View]  FIZ1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000179943 [Gene_View]  chr19:56102737-56110893 [Contig_View]  FIZ1 [Vega]
ICGC DataPortalENSG00000179943
TCGA cBioPortalFIZ1
AceView (NCBI)FIZ1
Genatlas (Paris)FIZ1
WikiGenes84922
SOURCE (Princeton)FIZ1
Genetics Home Reference (NIH)FIZ1
Genomic and cartography
GoldenPath hg19 (UCSC)FIZ1  -     chr19:56102737-56110893 -  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FIZ1  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblFIZ1 - 19q13.42 [CytoView hg19]  FIZ1 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIFIZ1 [Mapview hg19]  FIZ1 [Mapview hg38]
OMIM609133   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_032836
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FIZ1
Cluster EST : UnigeneHs.515617 [ NCBI ]
CGAP (NCI)Hs.515617
Alternative Splicing GalleryENSG00000179943
Gene ExpressionFIZ1 [ NCBI-GEO ]   FIZ1 [ EBI - ARRAY_EXPRESS ]   FIZ1 [ SEEK ]   FIZ1 [ MEM ]
Gene Expression Viewer (FireBrowse)FIZ1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84922
GTEX Portal (Tissue expression)FIZ1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SL8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SL8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SL8
Splice isoforms : SwissVarQ96SL8
PhosPhoSitePlusQ96SL8
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)FIZ1
DMDM Disease mutations84922
Blocks (Seattle)FIZ1
SuperfamilyQ96SL8
Human Protein AtlasENSG00000179943
Peptide AtlasQ96SL8
HPRD07870
IPIIPI00045801   
Protein Interaction databases
DIP (DOE-UCLA)Q96SL8
IntAct (EBI)Q96SL8
FunCoupENSG00000179943
BioGRIDFIZ1
STRING (EMBL)FIZ1
ZODIACFIZ1
Ontologies - Pathways
QuickGOQ96SL8
Ontology : AmiGOpositive regulation of protein phosphorylation  nucleic acid binding  nucleus  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  receptor tyrosine kinase binding  metal ion binding  
Ontology : EGO-EBIpositive regulation of protein phosphorylation  nucleic acid binding  nucleus  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  receptor tyrosine kinase binding  metal ion binding  
NDEx NetworkFIZ1
Atlas of Cancer Signalling NetworkFIZ1
Wikipedia pathwaysFIZ1
Orthology - Evolution
OrthoDB84922
GeneTree (enSembl)ENSG00000179943
Phylogenetic Trees/Animal Genes : TreeFamFIZ1
HOVERGENQ96SL8
HOGENOMQ96SL8
Homologs : HomoloGeneFIZ1
Homology/Alignments : Family Browser (UCSC)FIZ1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFIZ1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FIZ1
dbVarFIZ1
ClinVarFIZ1
1000_GenomesFIZ1 
Exome Variant ServerFIZ1
ExAC (Exome Aggregation Consortium)FIZ1 (select the gene name)
Genetic variants : HAPMAP84922
Genomic Variants (DGV)FIZ1 [DGVbeta]
DECIPHER (Syndromes)19:56102737-56110893  ENSG00000179943
CONAN: Copy Number AnalysisFIZ1 
Mutations
ICGC Data PortalFIZ1 
TCGA Data PortalFIZ1 
Broad Tumor PortalFIZ1
OASIS PortalFIZ1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFIZ1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFIZ1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FIZ1
DgiDB (Drug Gene Interaction Database)FIZ1
DoCM (Curated mutations)FIZ1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FIZ1 (select a term)
intoGenFIZ1
Cancer3DFIZ1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609133   
Orphanet
MedgenFIZ1
Genetic Testing Registry FIZ1
NextProtQ96SL8 [Medical]
TSGene84922
GENETestsFIZ1
Huge Navigator FIZ1 [HugePedia]
snp3D : Map Gene to Disease84922
BioCentury BCIQFIZ1
ClinGenFIZ1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84922
Chemical/Pharm GKB GenePA162388597
Clinical trialFIZ1
Miscellaneous
canSAR (ICR)FIZ1 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFIZ1
EVEXFIZ1
GoPubMedFIZ1
iHOPFIZ1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:01:20 CEST 2017

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