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FKBP14 (FK506 binding protein 14)

Identity

Other aliasEDSKMH
FKBP22
IPBP12
HGNC (Hugo) FKBP14
LocusID (NCBI) 55033
Atlas_Id 56718
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 30010583 and ends at 30026801 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FKBP14   18625
Cards
Entrez_Gene (NCBI)FKBP14  55033  FK506 binding protein 14
AliasesEDSKMH; FKBP22; IPBP12
GeneCards (Weizmann)FKBP14
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:30010583-30026801 [Contig_View]  FKBP14 [Vega]
TCGA cBioPortalFKBP14
AceView (NCBI)FKBP14
Genatlas (Paris)FKBP14
WikiGenes55033
SOURCE (Princeton)FKBP14
Genetics Home Reference (NIH)FKBP14
Genomic and cartography
GoldenPath hg38 (UCSC)FKBP14  -     chr7:30010583-30026801 -  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FKBP14  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblFKBP14 - 7p14.3 [CytoView hg19]  FKBP14 - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIFKBP14 [Mapview hg19]  FKBP14 [Mapview hg38]
OMIM614505   614557   
Gene and transcription
Genbank (Entrez)AK000738 AK309552 AY358643 BC005206 CR748502
RefSeq transcript (Entrez)NM_017946
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FKBP14
Cluster EST : UnigeneHs.390838 [ NCBI ]
CGAP (NCI)Hs.390838
Gene ExpressionFKBP14 [ NCBI-GEO ]   FKBP14 [ EBI - ARRAY_EXPRESS ]   FKBP14 [ SEEK ]   FKBP14 [ MEM ]
Gene Expression Viewer (FireBrowse)FKBP14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55033
GTEX Portal (Tissue expression)FKBP14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NWM8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NWM8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NWM8
Splice isoforms : SwissVarQ9NWM8
Catalytic activity : Enzyme5.2.1.8 [ Enzyme-Expasy ]   5.2.1.85.2.1.8 [ IntEnz-EBI ]   5.2.1.8 [ BRENDA ]   5.2.1.8 [ KEGG ]   
PhosPhoSitePlusQ9NWM8
Domaine pattern : Prosite (Expaxy)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)    ER_TARGET (PS00014)    FKBP_PPIASE (PS50059)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF_Hand_1_Ca_BS    EF_hand_dom    PPIase_FKBP    PPIase_FKBP_dom   
Domain families : Pfam (Sanger)EF-hand_7 (PF13499)    FKBP_C (PF00254)   
Domain families : Pfam (NCBI)pfam13499    pfam00254   
Conserved Domain (NCBI)FKBP14
DMDM Disease mutations55033
Blocks (Seattle)FKBP14
PDB (SRS)4DIP    4MSP   
PDB (PDBSum)4DIP    4MSP   
PDB (IMB)4DIP    4MSP   
PDB (RSDB)4DIP    4MSP   
Structural Biology KnowledgeBase4DIP    4MSP   
SCOP (Structural Classification of Proteins)4DIP    4MSP   
CATH (Classification of proteins structures)4DIP    4MSP   
SuperfamilyQ9NWM8
Peptide AtlasQ9NWM8
IPIIPI00017331   IPI00917900   IPI00917767   
Protein Interaction databases
DIP (DOE-UCLA)Q9NWM8
IntAct (EBI)Q9NWM8
BioGRIDFKBP14
STRING (EMBL)FKBP14
ZODIACFKBP14
Ontologies - Pathways
QuickGOQ9NWM8
Ontology : AmiGOprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  calcium ion binding  FK506 binding  cytoplasm  endoplasmic reticulum lumen  IRE1-mediated unfolded protein response  chaperone-mediated protein folding  
Ontology : EGO-EBIprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  calcium ion binding  FK506 binding  cytoplasm  endoplasmic reticulum lumen  IRE1-mediated unfolded protein response  chaperone-mediated protein folding  
NDEx NetworkFKBP14
Atlas of Cancer Signalling NetworkFKBP14
Wikipedia pathwaysFKBP14
Orthology - Evolution
OrthoDB55033
Phylogenetic Trees/Animal Genes : TreeFamFKBP14
HOVERGENQ9NWM8
HOGENOMQ9NWM8
Homologs : HomoloGeneFKBP14
Homology/Alignments : Family Browser (UCSC)FKBP14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFKBP14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FKBP14
dbVarFKBP14
ClinVarFKBP14
1000_GenomesFKBP14 
Exome Variant ServerFKBP14
ExAC (Exome Aggregation Consortium)FKBP14 (select the gene name)
Genetic variants : HAPMAP55033
Genomic Variants (DGV)FKBP14 [DGVbeta]
DECIPHERFKBP14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFKBP14 
Mutations
ICGC Data PortalFKBP14 
TCGA Data PortalFKBP14 
Broad Tumor PortalFKBP14
OASIS PortalFKBP14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFKBP14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFKBP14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FKBP14
DgiDB (Drug Gene Interaction Database)FKBP14
DoCM (Curated mutations)FKBP14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FKBP14 (select a term)
intoGenFKBP14
Cancer3DFKBP14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614505    614557   
Orphanet
MedgenFKBP14
Genetic Testing Registry FKBP14
NextProtQ9NWM8 [Medical]
TSGene55033
GENETestsFKBP14
Target ValidationFKBP14
Huge Navigator FKBP14 [HugePedia]
snp3D : Map Gene to Disease55033
BioCentury BCIQFKBP14
ClinGenFKBP14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55033
Chemical/Pharm GKB GenePA38608
Clinical trialFKBP14
Miscellaneous
canSAR (ICR)FKBP14 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFKBP14
EVEXFKBP14
GoPubMedFKBP14
iHOPFKBP14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:34:02 CEST 2017

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