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FKBP1A-SDCBP2 (FKBP1A-SDCBP2 readthrough (NMD candidate))

Identity

Other alias-
HGNC (Hugo) FKBP1A-SDCBP2
LocusID (NCBI) 100528031
Atlas_Id 63395
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 1309911 and ends at 1393172 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FKBP1A-SDCBP2   41997
Cards
Entrez_Gene (NCBI)FKBP1A-SDCBP2  100528031  FKBP1A-SDCBP2 readthrough (NMD candidate)
Aliases
GeneCards (Weizmann)FKBP1A-SDCBP2
Ensembl hg19 (Hinxton)ENSG00000234684 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234684 [Gene_View]  chr20:1309911-1393172 [Contig_View]  FKBP1A-SDCBP2 [Vega]
ICGC DataPortalENSG00000234684
TCGA cBioPortalFKBP1A-SDCBP2
AceView (NCBI)FKBP1A-SDCBP2
Genatlas (Paris)FKBP1A-SDCBP2
WikiGenes100528031
SOURCE (Princeton)FKBP1A-SDCBP2
Genetics Home Reference (NIH)FKBP1A-SDCBP2
Genomic and cartography
GoldenPath hg38 (UCSC)FKBP1A-SDCBP2  -     chr20:1309911-1393172 -  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FKBP1A-SDCBP2  -     20p13   [Description]    (hg19-Feb_2009)
EnsemblFKBP1A-SDCBP2 - 20p13 [CytoView hg19]  FKBP1A-SDCBP2 - 20p13 [CytoView hg38]
Mapping of homologs : NCBIFKBP1A-SDCBP2 [Mapview hg19]  FKBP1A-SDCBP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK309026 BM925547
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FKBP1A-SDCBP2
Cluster EST : UnigeneHs.657015 [ NCBI ]
CGAP (NCI)Hs.657015
Alternative Splicing GalleryENSG00000234684
Gene ExpressionFKBP1A-SDCBP2 [ NCBI-GEO ]   FKBP1A-SDCBP2 [ EBI - ARRAY_EXPRESS ]   FKBP1A-SDCBP2 [ SEEK ]   FKBP1A-SDCBP2 [ MEM ]
Gene Expression Viewer (FireBrowse)FKBP1A-SDCBP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100528031
GTEX Portal (Tissue expression)FKBP1A-SDCBP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FKBP1A-SDCBP2
DMDM Disease mutations100528031
Blocks (Seattle)FKBP1A-SDCBP2
Human Protein AtlasENSG00000234684
Protein Interaction databases
FunCoupENSG00000234684
BioGRIDFKBP1A-SDCBP2
STRING (EMBL)FKBP1A-SDCBP2
ZODIACFKBP1A-SDCBP2
Ontologies - Pathways
Huge Navigator FKBP1A-SDCBP2 [HugePedia]
snp3D : Map Gene to Disease100528031
BioCentury BCIQFKBP1A-SDCBP2
ClinGenFKBP1A-SDCBP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100528031
Clinical trialFKBP1A-SDCBP2
Miscellaneous
canSAR (ICR)FKBP1A-SDCBP2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFKBP1A-SDCBP2
EVEXFKBP1A-SDCBP2
GoPubMedFKBP1A-SDCBP2
iHOPFKBP1A-SDCBP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:31 CEST 2017

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