Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FKBP1AP1 (FK506 binding protein 1A pseudogene 1)

Identity

Alias_namesFKBP1P1
FK506-binding protein 1 pseudogene 1
FK506 binding protein 1 pseudogene 1
FK506 binding protein 1A, 12kDa pseudogene 1
Other aliasFKBP12
HGNC (Hugo) FKBP1AP1
LocusID (NCBI) 2282
Atlas_Id 63394
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 57825299 and ends at 57827462 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NFYA (6p21.1) / FKBP1AP1 (19q13.43)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FKBP1AP1   3714
Cards
Entrez_Gene (NCBI)FKBP1AP1  2282  FK506 binding protein 1A pseudogene 1
AliasesFKBP12; FKBP1P1
GeneCards (Weizmann)FKBP1AP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:57825299-57827462 [Contig_View]  FKBP1AP1 [Vega]
TCGA cBioPortalFKBP1AP1
AceView (NCBI)FKBP1AP1
Genatlas (Paris)FKBP1AP1
WikiGenes2282
SOURCE (Princeton)FKBP1AP1
Genetics Home Reference (NIH)FKBP1AP1
Genomic and cartography
GoldenPath hg38 (UCSC)FKBP1AP1  -     chr19:57825299-57827462 -  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FKBP1AP1  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblFKBP1AP1 - 19q13.43 [CytoView hg19]  FKBP1AP1 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIFKBP1AP1 [Mapview hg19]  FKBP1AP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI076645
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FKBP1AP1
Cluster EST : UnigeneHs.720356 [ NCBI ]
CGAP (NCI)Hs.720356
Gene ExpressionFKBP1AP1 [ NCBI-GEO ]   FKBP1AP1 [ EBI - ARRAY_EXPRESS ]   FKBP1AP1 [ SEEK ]   FKBP1AP1 [ MEM ]
Gene Expression Viewer (FireBrowse)FKBP1AP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)2282
GTEX Portal (Tissue expression)FKBP1AP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FKBP1AP1
DMDM Disease mutations2282
Blocks (Seattle)FKBP1AP1
Protein Interaction databases
BioGRIDFKBP1AP1
STRING (EMBL)FKBP1AP1
ZODIACFKBP1AP1
Ontologies - Pathways
Huge Navigator FKBP1AP1 [HugePedia]
snp3D : Map Gene to Disease2282
BioCentury BCIQFKBP1AP1
ClinGenFKBP1AP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2282
Chemical/Pharm GKB GenePA28155
Clinical trialFKBP1AP1
Miscellaneous
canSAR (ICR)FKBP1AP1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFKBP1AP1
EVEXFKBP1AP1
GoPubMedFKBP1AP1
iHOPFKBP1AP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:38:36 CET 2017

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