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FKBP2 (FKBP prolyl isomerase 2)

Identity

Alias (NCBI)FKBP-13
FKBP13
PPIase
HGNC (Hugo) FKBP2
HGNC Alias symbFKBP-13
PPIase
HGNC Alias nameFK506 binding protein 2 (13kD)
 peptidyl-prolyl cis-trans isomerase
 rapamycin-binding protein
 proline isomerase
HGNC Previous nameFK506-binding protein 2 (13kD)
 FK506 binding protein 2, 13kDa
LocusID (NCBI) 2286
Atlas_Id 63397
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 64242116 and ends at 64244135 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DPP3 (11q13.2) / FKBP2 (11q13.1)FKBP2 (11q13.1) / PLEC (8q24.3)FKBP2 (11q13.1) / TRIM8 (10q24.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

 

Nomenclature
HGNC (Hugo)FKBP2   3718
Cards
Entrez_Gene (NCBI)FKBP2    FKBP prolyl isomerase 2
AliasesFKBP-13; FKBP13; PPIase
GeneCards (Weizmann)FKBP2
Ensembl hg19 (Hinxton)ENSG00000173486 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173486 [Gene_View]  ENSG00000173486 [Sequence]  chr11:64242116-64244135 [Contig_View]  FKBP2 [Vega]
ICGC DataPortalENSG00000173486
TCGA cBioPortalFKBP2
AceView (NCBI)FKBP2
Genatlas (Paris)FKBP2
SOURCE (Princeton)FKBP2
Genetics Home Reference (NIH)FKBP2
Genomic and cartography
GoldenPath hg38 (UCSC)FKBP2  -     chr11:64242116-64244135 +  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FKBP2  -     11q13.1   [Description]    (hg19-Feb_2009)
GoldenPathFKBP2 - 11q13.1 [CytoView hg19]  FKBP2 - 11q13.1 [CytoView hg38]
ImmunoBaseENSG00000173486
Genome Data Viewer NCBIFKBP2 [Mapview hg19]  
OMIM186946   
Gene and transcription
Genbank (Entrez)AW450265 BC003384 BC091475 BT009861 BU682774
RefSeq transcript (Entrez)NM_001135208 NM_001370360 NM_001370362 NM_001370363 NM_001370365 NM_001370367 NM_004470 NM_057092
Consensus coding sequences : CCDS (NCBI)FKBP2
Gene ExpressionFKBP2 [ NCBI-GEO ]   FKBP2 [ EBI - ARRAY_EXPRESS ]   FKBP2 [ SEEK ]   FKBP2 [ MEM ]
Gene Expression Viewer (FireBrowse)FKBP2 [ Firebrowse - Broad ]
GenevisibleExpression of FKBP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2286
GTEX Portal (Tissue expression)FKBP2
Human Protein AtlasENSG00000173486-FKBP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP26885   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP26885  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP26885
Catalytic activity : Enzyme5.2.1.8 [ Enzyme-Expasy ]   5.2.1.85.2.1.8 [ IntEnz-EBI ]   5.2.1.8 [ BRENDA ]   5.2.1.8 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusP26885
Domaine pattern : Prosite (Expaxy)FKBP_PPIASE (PS50059)   
Domains : Interpro (EBI)PPIase_FKBP_dom   
Domain families : Pfam (Sanger)FKBP_C (PF00254)   
Domain families : Pfam (NCBI)pfam00254   
Conserved Domain (NCBI)FKBP2
PDB (RSDB)2PBC    4NNR   
PDB Europe2PBC    4NNR   
PDB (PDBSum)2PBC    4NNR   
PDB (IMB)2PBC    4NNR   
Structural Biology KnowledgeBase2PBC    4NNR   
SCOP (Structural Classification of Proteins)2PBC    4NNR   
CATH (Classification of proteins structures)2PBC    4NNR   
SuperfamilyP26885
AlphaFold pdb e-kbP26885   
Human Protein Atlas [tissue]ENSG00000173486-FKBP2 [tissue]
HPRD01742
Protein Interaction databases
DIP (DOE-UCLA)P26885
IntAct (EBI)P26885
BioGRIDFKBP2
STRING (EMBL)FKBP2
ZODIACFKBP2
Ontologies - Pathways
QuickGOP26885
Ontology : AmiGOprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  protein binding  FK506 binding  endoplasmic reticulum  endoplasmic reticulum membrane  chaperone-mediated protein folding  
Ontology : EGO-EBIprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  protein binding  FK506 binding  endoplasmic reticulum  endoplasmic reticulum membrane  chaperone-mediated protein folding  
NDEx NetworkFKBP2
Atlas of Cancer Signalling NetworkFKBP2
Wikipedia pathwaysFKBP2
Orthology - Evolution
OrthoDB2286
GeneTree (enSembl)ENSG00000173486
Phylogenetic Trees/Animal Genes : TreeFamFKBP2
Homologs : HomoloGeneFKBP2
Homology/Alignments : Family Browser (UCSC)FKBP2
Gene fusions - Rearrangements
Fusion : QuiverFKBP2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFKBP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FKBP2
dbVarFKBP2
ClinVarFKBP2
MonarchFKBP2
1000_GenomesFKBP2 
Exome Variant ServerFKBP2
GNOMAD BrowserENSG00000173486
Varsome BrowserFKBP2
ACMGFKBP2 variants
VarityP26885
Genomic Variants (DGV)FKBP2 [DGVbeta]
DECIPHERFKBP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFKBP2 
Mutations
ICGC Data PortalFKBP2 
TCGA Data PortalFKBP2 
Broad Tumor PortalFKBP2
OASIS PortalFKBP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFKBP2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFKBP2
Mutations and Diseases : HGMDFKBP2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFKBP2
DgiDB (Drug Gene Interaction Database)FKBP2
DoCM (Curated mutations)FKBP2
CIViC (Clinical Interpretations of Variants in Cancer)FKBP2
Cancer3DFKBP2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM186946   
Orphanet
DisGeNETFKBP2
MedgenFKBP2
Genetic Testing Registry FKBP2
NextProtP26885 [Medical]
GENETestsFKBP2
Target ValidationFKBP2
Huge Navigator FKBP2 [HugePedia]
ClinGenFKBP2
Clinical trials, drugs, therapy
MyCancerGenomeFKBP2
Protein Interactions : CTDFKBP2
Pharm GKB GenePA28159
PharosP26885
Clinical trialFKBP2
Miscellaneous
canSAR (ICR)FKBP2
HarmonizomeFKBP2
DataMed IndexFKBP2
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFKBP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:50:35 CEST 2021
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