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FKBP9 (FK506 binding protein 9)

Identity

Alias_namesFK506-binding protein 9 (63 kD)
FK506 binding protein 9, 63 kDa
Alias_symbol (synonym)FKBP60
FKBP63
Other aliasPPIase
HGNC (Hugo) FKBP9
LocusID (NCBI) 11328
Atlas_Id 63401
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 32957404 and ends at 33006931 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BBS9 (7p14.3) / FKBP9 (7p14.3)SFTPB (2p11.2) / FKBP9 (7p14.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FKBP9   3725
Cards
Entrez_Gene (NCBI)FKBP9  11328  FK506 binding protein 9
AliasesFKBP60; FKBP63; PPIase
GeneCards (Weizmann)FKBP9
Ensembl hg19 (Hinxton)ENSG00000122642 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000122642 [Gene_View]  chr7:32957404-33006931 [Contig_View]  FKBP9 [Vega]
ICGC DataPortalENSG00000122642
TCGA cBioPortalFKBP9
AceView (NCBI)FKBP9
Genatlas (Paris)FKBP9
WikiGenes11328
SOURCE (Princeton)FKBP9
Genetics Home Reference (NIH)FKBP9
Genomic and cartography
GoldenPath hg38 (UCSC)FKBP9  -     chr7:32957404-33006931 +  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FKBP9  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblFKBP9 - 7p14.3 [CytoView hg19]  FKBP9 - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIFKBP9 [Mapview hg19]  FKBP9 [Mapview hg38]
OMIM616257   
Gene and transcription
Genbank (Entrez)AB209352 AF089745 AK075331 AK128597 AK293440
RefSeq transcript (Entrez)NM_001284341 NM_001284343 NM_007270
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FKBP9
Cluster EST : UnigeneHs.103934 [ NCBI ]
CGAP (NCI)Hs.103934
Alternative Splicing GalleryENSG00000122642
Gene ExpressionFKBP9 [ NCBI-GEO ]   FKBP9 [ EBI - ARRAY_EXPRESS ]   FKBP9 [ SEEK ]   FKBP9 [ MEM ]
Gene Expression Viewer (FireBrowse)FKBP9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11328
GTEX Portal (Tissue expression)FKBP9
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95302   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95302  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95302
Splice isoforms : SwissVarO95302
Catalytic activity : Enzyme5.2.1.8 [ Enzyme-Expasy ]   5.2.1.85.2.1.8 [ IntEnz-EBI ]   5.2.1.8 [ BRENDA ]   5.2.1.8 [ KEGG ]   
PhosPhoSitePlusO95302
Domaine pattern : Prosite (Expaxy)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)    ER_TARGET (PS00014)    FKBP_PPIASE (PS50059)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF_Hand_1_Ca_BS    EF_hand_dom    PPIase_FKBP    PPIase_FKBP_dom   
Domain families : Pfam (Sanger)FKBP_C (PF00254)   
Domain families : Pfam (NCBI)pfam00254   
Domain families : Smart (EMBL)EFh (SM00054)  
Conserved Domain (NCBI)FKBP9
DMDM Disease mutations11328
Blocks (Seattle)FKBP9
SuperfamilyO95302
Human Protein AtlasENSG00000122642
Peptide AtlasO95302
HPRD06510
IPIIPI00182126   IPI00953596   IPI00984262   IPI01012360   IPI00922428   IPI00555592   
Protein Interaction databases
DIP (DOE-UCLA)O95302
IntAct (EBI)O95302
FunCoupENSG00000122642
BioGRIDFKBP9
STRING (EMBL)FKBP9
ZODIACFKBP9
Ontologies - Pathways
QuickGOO95302
Ontology : AmiGOprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  calcium ion binding  FK506 binding  cytoplasm  endoplasmic reticulum  protein folding  chaperone-mediated protein folding  
Ontology : EGO-EBIprotein peptidyl-prolyl isomerization  peptidyl-prolyl cis-trans isomerase activity  calcium ion binding  FK506 binding  cytoplasm  endoplasmic reticulum  protein folding  chaperone-mediated protein folding  
NDEx NetworkFKBP9
Atlas of Cancer Signalling NetworkFKBP9
Wikipedia pathwaysFKBP9
Orthology - Evolution
OrthoDB11328
GeneTree (enSembl)ENSG00000122642
Phylogenetic Trees/Animal Genes : TreeFamFKBP9
HOVERGENO95302
HOGENOMO95302
Homologs : HomoloGeneFKBP9
Homology/Alignments : Family Browser (UCSC)FKBP9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFKBP9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FKBP9
dbVarFKBP9
ClinVarFKBP9
1000_GenomesFKBP9 
Exome Variant ServerFKBP9
ExAC (Exome Aggregation Consortium)FKBP9 (select the gene name)
Genetic variants : HAPMAP11328
Genomic Variants (DGV)FKBP9 [DGVbeta]
DECIPHERFKBP9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFKBP9 
Mutations
ICGC Data PortalFKBP9 
TCGA Data PortalFKBP9 
Broad Tumor PortalFKBP9
OASIS PortalFKBP9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFKBP9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFKBP9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FKBP9
DgiDB (Drug Gene Interaction Database)FKBP9
DoCM (Curated mutations)FKBP9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FKBP9 (select a term)
intoGenFKBP9
Cancer3DFKBP9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616257   
Orphanet
MedgenFKBP9
Genetic Testing Registry FKBP9
NextProtO95302 [Medical]
TSGene11328
GENETestsFKBP9
Target ValidationFKBP9
Huge Navigator FKBP9 [HugePedia]
snp3D : Map Gene to Disease11328
BioCentury BCIQFKBP9
ClinGenFKBP9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11328
Chemical/Pharm GKB GenePA28166
Clinical trialFKBP9
Miscellaneous
canSAR (ICR)FKBP9 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFKBP9
EVEXFKBP9
GoPubMedFKBP9
iHOPFKBP9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:32 CEST 2017

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