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FKBP9P1 (FK506 binding protein 9 pseudogene 1)

Identity

Alias_namesFKBP9L
FK506 binding protein 9-like
Alias_symbol (synonym)MGC20531
Other alias
HGNC (Hugo) FKBP9P1
LocusID (NCBI) 360132
Atlas_Id 63402
Location 7p11.2  [Link to chromosome band 7p11]
Location_base_pair Starts at 55682628 and ends at 55687988 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FKBP9P1   23568
Cards
Entrez_Gene (NCBI)FKBP9P1  360132  FK506 binding protein 9 pseudogene 1
AliasesFKBP9L
GeneCards (Weizmann)FKBP9P1
Ensembl hg19 (Hinxton)ENSG00000176826 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176826 [Gene_View]  chr7:55682628-55687988 [Contig_View]  FKBP9P1 [Vega]
ICGC DataPortalENSG00000176826
TCGA cBioPortalFKBP9P1
AceView (NCBI)FKBP9P1
Genatlas (Paris)FKBP9P1
WikiGenes360132
SOURCE (Princeton)FKBP9P1
Genetics Home Reference (NIH)FKBP9P1
Genomic and cartography
GoldenPath hg38 (UCSC)FKBP9P1  -     chr7:55682628-55687988 -  7p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FKBP9P1  -     7p11.2   [Description]    (hg19-Feb_2009)
EnsemblFKBP9P1 - 7p11.2 [CytoView hg19]  FKBP9P1 - 7p11.2 [CytoView hg38]
Mapping of homologs : NCBIFKBP9P1 [Mapview hg19]  FKBP9P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK289438 AK312981 BC011872 BM014562 BM041005
RefSeq transcript (Entrez)NM_182827
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FKBP9P1
Cluster EST : UnigeneHs.446691 [ NCBI ]
CGAP (NCI)Hs.446691
Alternative Splicing GalleryENSG00000176826
Gene ExpressionFKBP9P1 [ NCBI-GEO ]   FKBP9P1 [ EBI - ARRAY_EXPRESS ]   FKBP9P1 [ SEEK ]   FKBP9P1 [ MEM ]
Gene Expression Viewer (FireBrowse)FKBP9P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)360132
GTEX Portal (Tissue expression)FKBP9P1
Human Protein AtlasENSG00000176826-FKBP9P1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ75LS8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ75LS8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ75LS8
Splice isoforms : SwissVarQ75LS8
PhosPhoSitePlusQ75LS8
Domaine pattern : Prosite (Expaxy)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)    ER_TARGET (PS00014)    FKBP_PPIASE (PS50059)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF_Hand_1_Ca_BS    EF_hand_dom    PPIase_FKBP    PPIase_FKBP_dom   
Domain families : Pfam (Sanger)EF-hand_5 (PF13202)    FKBP_C (PF00254)   
Domain families : Pfam (NCBI)pfam13202    pfam00254   
Domain families : Smart (EMBL)EFh (SM00054)  
Conserved Domain (NCBI)FKBP9P1
DMDM Disease mutations360132
Blocks (Seattle)FKBP9P1
SuperfamilyQ75LS8
Human Protein Atlas [tissue]ENSG00000176826-FKBP9P1 [tissue]
Peptide AtlasQ75LS8
HPRD16900
IPIIPI00645860   
Protein Interaction databases
DIP (DOE-UCLA)Q75LS8
IntAct (EBI)Q75LS8
FunCoupENSG00000176826
BioGRIDFKBP9P1
STRING (EMBL)FKBP9P1
ZODIACFKBP9P1
Ontologies - Pathways
QuickGOQ75LS8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkFKBP9P1
Atlas of Cancer Signalling NetworkFKBP9P1
Wikipedia pathwaysFKBP9P1
Orthology - Evolution
OrthoDB360132
GeneTree (enSembl)ENSG00000176826
Phylogenetic Trees/Animal Genes : TreeFamFKBP9P1
HOVERGENQ75LS8
HOGENOMQ75LS8
Homologs : HomoloGeneFKBP9P1
Homology/Alignments : Family Browser (UCSC)FKBP9P1
Gene fusions - Rearrangements
Tumor Fusion PortalFKBP9P1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFKBP9P1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FKBP9P1
dbVarFKBP9P1
ClinVarFKBP9P1
1000_GenomesFKBP9P1 
Exome Variant ServerFKBP9P1
ExAC (Exome Aggregation Consortium)ENSG00000176826
GNOMAD BrowserENSG00000176826
Genetic variants : HAPMAP360132
Genomic Variants (DGV)FKBP9P1 [DGVbeta]
DECIPHERFKBP9P1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFKBP9P1 
Mutations
ICGC Data PortalFKBP9P1 
TCGA Data PortalFKBP9P1 
Broad Tumor PortalFKBP9P1
OASIS PortalFKBP9P1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFKBP9P1
BioMutasearch FKBP9P1
DgiDB (Drug Gene Interaction Database)FKBP9P1
DoCM (Curated mutations)FKBP9P1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FKBP9P1 (select a term)
intoGenFKBP9P1
Cancer3DFKBP9P1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETFKBP9P1
MedgenFKBP9P1
Genetic Testing Registry FKBP9P1
NextProtQ75LS8 [Medical]
TSGene360132
GENETestsFKBP9P1
Target ValidationFKBP9P1
Huge Navigator FKBP9P1 [HugePedia]
snp3D : Map Gene to Disease360132
BioCentury BCIQFKBP9P1
ClinGenFKBP9P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD360132
Chemical/Pharm GKB GenePA134962843
Clinical trialFKBP9P1
Miscellaneous
canSAR (ICR)FKBP9P1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFKBP9P1
EVEXFKBP9P1
GoPubMedFKBP9P1
iHOPFKBP9P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:16:06 CET 2017

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