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FKBPL (FK506 binding protein like)

Identity

Alias_namesFK506-binding protein like
Alias_symbol (synonym)DIR1
NG7
WISp39
Other aliasFKBP4
WISP39
HGNC (Hugo) FKBPL
LocusID (NCBI) 63943
Atlas_Id 51402
Location 6p21.32  [Link to chromosome band 6p21]
Location_base_pair Starts at 32128707 and ends at 32130290 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ABHD16A (6p21.33) / FKBPL (6p21.33)LOC100652768 (11q23.3) / FKBPL (6p21.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FKBPL   13949
Cards
Entrez_Gene (NCBI)FKBPL  63943  FK506 binding protein like
AliasesDIR1; FKBP4; NG7; WISP39
GeneCards (Weizmann)FKBPL
Ensembl hg19 (Hinxton)ENSG00000204315 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204315 [Gene_View]  chr6:32128707-32130290 [Contig_View]  FKBPL [Vega]
ICGC DataPortalENSG00000204315
TCGA cBioPortalFKBPL
AceView (NCBI)FKBPL
Genatlas (Paris)FKBPL
WikiGenes63943
SOURCE (Princeton)FKBPL
Genetics Home Reference (NIH)FKBPL
Genomic and cartography
GoldenPath hg38 (UCSC)FKBPL  -     chr6:32128707-32130290 -  6p21.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FKBPL  -     6p21.32   [Description]    (hg19-Feb_2009)
EnsemblFKBPL - 6p21.32 [CytoView hg19]  FKBPL - 6p21.32 [CytoView hg38]
Mapping of homologs : NCBIFKBPL [Mapview hg19]  FKBPL [Mapview hg38]
OMIM617076   
Gene and transcription
Genbank (Entrez)AK027119 AK291418 BC004168 BC011966 CR457374
RefSeq transcript (Entrez)NM_022110
RefSeq genomic (Entrez)NC_000006 NC_018917 NG_033940 NT_113891 NT_167245 NT_167247
Consensus coding sequences : CCDS (NCBI)FKBPL
Cluster EST : UnigeneHs.520042 [ NCBI ]
CGAP (NCI)Hs.520042
Alternative Splicing GalleryENSG00000204315
Gene ExpressionFKBPL [ NCBI-GEO ]   FKBPL [ EBI - ARRAY_EXPRESS ]   FKBPL [ SEEK ]   FKBPL [ MEM ]
Gene Expression Viewer (FireBrowse)FKBPL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63943
GTEX Portal (Tissue expression)FKBPL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UIM3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UIM3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UIM3
Splice isoforms : SwissVarQ9UIM3
PhosPhoSitePlusQ9UIM3
Domaine pattern : Prosite (Expaxy)TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (EBI)PPIase_FKBP    TPR-contain_dom    TPR-like_helical_dom    TPR_1    TPR_repeat   
Domain families : Pfam (Sanger)TPR_1 (PF00515)   
Domain families : Pfam (NCBI)pfam00515   
Domain families : Smart (EMBL)TPR (SM00028)  
Conserved Domain (NCBI)FKBPL
DMDM Disease mutations63943
Blocks (Seattle)FKBPL
SuperfamilyQ9UIM3
Human Protein AtlasENSG00000204315
Peptide AtlasQ9UIM3
HPRD16901
IPIIPI00032110   
Protein Interaction databases
DIP (DOE-UCLA)Q9UIM3
IntAct (EBI)Q9UIM3
FunCoupENSG00000204315
BioGRIDFKBPL
STRING (EMBL)FKBPL
ZODIACFKBPL
Ontologies - Pathways
QuickGOQ9UIM3
Ontology : AmiGOprotein binding  cytosol  response to radiation  protein stabilization  
Ontology : EGO-EBIprotein binding  cytosol  response to radiation  protein stabilization  
NDEx NetworkFKBPL
Atlas of Cancer Signalling NetworkFKBPL
Wikipedia pathwaysFKBPL
Orthology - Evolution
OrthoDB63943
GeneTree (enSembl)ENSG00000204315
Phylogenetic Trees/Animal Genes : TreeFamFKBPL
HOVERGENQ9UIM3
HOGENOMQ9UIM3
Homologs : HomoloGeneFKBPL
Homology/Alignments : Family Browser (UCSC)FKBPL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFKBPL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FKBPL
dbVarFKBPL
ClinVarFKBPL
1000_GenomesFKBPL 
Exome Variant ServerFKBPL
ExAC (Exome Aggregation Consortium)FKBPL (select the gene name)
Genetic variants : HAPMAP63943
Genomic Variants (DGV)FKBPL [DGVbeta]
DECIPHERFKBPL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFKBPL 
Mutations
ICGC Data PortalFKBPL 
TCGA Data PortalFKBPL 
Broad Tumor PortalFKBPL
OASIS PortalFKBPL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFKBPL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FKBPL
DgiDB (Drug Gene Interaction Database)FKBPL
DoCM (Curated mutations)FKBPL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FKBPL (select a term)
intoGenFKBPL
Cancer3DFKBPL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617076   
Orphanet
MedgenFKBPL
Genetic Testing Registry FKBPL
NextProtQ9UIM3 [Medical]
TSGene63943
GENETestsFKBPL
Target ValidationFKBPL
Huge Navigator FKBPL [HugePedia]
snp3D : Map Gene to Disease63943
BioCentury BCIQFKBPL
ClinGenFKBPL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD63943
Chemical/Pharm GKB GenePA28167
Clinical trialFKBPL
Miscellaneous
canSAR (ICR)FKBPL (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFKBPL
EVEXFKBPL
GoPubMedFKBPL
iHOPFKBPL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:34:03 CEST 2017

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