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FLJ44635 (TPT1-like protein)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 392490
Atlas_Id 63514
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 72144184 and ends at 72161750 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)FLJ44635  392490  TPT1-like protein
Aliases
GeneCards (Weizmann)FLJ44635
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:72144184-72161750 [Contig_View]  FLJ44635 [Vega]
TCGA cBioPortalFLJ44635
AceView (NCBI)FLJ44635
Genatlas (Paris)FLJ44635
WikiGenes392490
SOURCE (Princeton)FLJ44635
Genetics Home Reference (NIH)FLJ44635
Genomic and cartography
GoldenPath hg38 (UCSC)FLJ44635  -     chrX:72144184-72161750 +  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FLJ44635  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblFLJ44635 - Xq13.1 [CytoView hg19]  FLJ44635 - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBIFLJ44635 [Mapview hg19]  FLJ44635 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126598 AY572224 BC137552 BC137564
RefSeq transcript (Entrez)NM_207422
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FLJ44635
Cluster EST : UnigeneHs.660859 [ NCBI ]
CGAP (NCI)Hs.660859
Gene ExpressionFLJ44635 [ NCBI-GEO ]   FLJ44635 [ EBI - ARRAY_EXPRESS ]   FLJ44635 [ SEEK ]   FLJ44635 [ MEM ]
Gene Expression Viewer (FireBrowse)FLJ44635 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)392490
GTEX Portal (Tissue expression)FLJ44635
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ56UQ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ56UQ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ56UQ5
Splice isoforms : SwissVarQ56UQ5
PhosPhoSitePlusQ56UQ5
Domaine pattern : Prosite (Expaxy)TCTP_1 (PS01002)    TCTP_3 (PS51797)   
Domains : Interpro (EBI)Mss4-like    Mss4/transl-control_tumor    Translation_control_tumour_CS    Translational_control_tumour_p   
Domain families : Pfam (Sanger)TCTP (PF00838)   
Domain families : Pfam (NCBI)pfam00838   
Conserved Domain (NCBI)FLJ44635
DMDM Disease mutations392490
Blocks (Seattle)FLJ44635
SuperfamilyQ56UQ5
Peptide AtlasQ56UQ5
HPRD13491
IPIIPI00410496   
Protein Interaction databases
DIP (DOE-UCLA)Q56UQ5
IntAct (EBI)Q56UQ5
BioGRIDFLJ44635
STRING (EMBL)FLJ44635
ZODIACFLJ44635
Ontologies - Pathways
QuickGOQ56UQ5
Ontology : AmiGOcalcium ion binding  cytoplasm  microtubule binding  cell differentiation  extracellular exosome  
Ontology : EGO-EBIcalcium ion binding  cytoplasm  microtubule binding  cell differentiation  extracellular exosome  
NDEx NetworkFLJ44635
Atlas of Cancer Signalling NetworkFLJ44635
Wikipedia pathwaysFLJ44635
Orthology - Evolution
OrthoDB392490
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ56UQ5
HOGENOMQ56UQ5
Homologs : HomoloGeneFLJ44635
Homology/Alignments : Family Browser (UCSC)FLJ44635
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFLJ44635 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FLJ44635
dbVarFLJ44635
ClinVarFLJ44635
1000_GenomesFLJ44635 
Exome Variant ServerFLJ44635
ExAC (Exome Aggregation Consortium)FLJ44635 (select the gene name)
Genetic variants : HAPMAP392490
Genomic Variants (DGV)FLJ44635 [DGVbeta]
DECIPHERFLJ44635 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFLJ44635 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFLJ44635  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMD-
BioMutasearch FLJ44635
DgiDB (Drug Gene Interaction Database)FLJ44635
DoCM (Curated mutations)FLJ44635 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FLJ44635 (select a term)
intoGenFLJ44635
Cancer3DFLJ44635(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFLJ44635
Genetic Testing Registry FLJ44635
NextProtQ56UQ5 [Medical]
TSGene392490
GENETestsFLJ44635
Target ValidationFLJ44635
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease392490
BioCentury BCIQFLJ44635
ClinGenFLJ44635
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD392490
Clinical trialFLJ44635
Miscellaneous
canSAR (ICR)FLJ44635 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFLJ44635
EVEXFLJ44635
GoPubMedFLJ44635
iHOPFLJ44635
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:08:45 CEST 2017

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