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FLOT2 (flotillin 2)

Identity

Other namesECS-1
ECS1
ESA
ESA1
M17S1
HGNC (Hugo) FLOT2
LocusID (NCBI) 2319
Location 17q11.2
Location_base_pair Starts at 27206357 and ends at 27224715 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)FLOT2   3758
Entrez_Gene (NCBI)FLOT2  2319  flotillin 2
Cards
GeneCards (Weizmann)FLOT2
Ensembl (Hinxton)ENSG00000132589 [Gene_View]  chr17:27206357-27224715 [Contig_View]  FLOT2 [Vega]
AceView (NCBI)FLOT2
Genatlas (Paris)FLOT2
SOURCE (Stanford)NM_004475
Genomic and cartography
GoldenPath (UCSC)FLOT2  -  17q11.2   chr17:27206357-27224715 -  17q11.2   [Description]    (hg19-Feb_2009)
EnsemblFLOT2 - 17q11.2 [CytoView]
Mapping of homologs : NCBIFLOT2 [Mapview]
OMIM131560   
Gene and transcription
Genbank (Entrez)AK225491 BC003683 BC017292 BT019477 BT019478
RefSeq transcript (SRS)NM_004475
RefSeq transcript (Entrez)NM_004475
RefSeq genomic (SRS)AC_000149 NC_000017 NC_018928 NT_010799 NW_001838430 NW_004078092
RefSeq genomic (Entrez)AC_000149 NC_000017 NC_018928 NT_010799 NW_001838430 NW_004078092
Consensus coding sequences : CCDS (NCBI)FLOT2
Cluster EST : UnigeneHs.514038 [ SRS ] Hs.514038 [ NCBI ]
CGAP (NCI)Hs.514038
Alternative Splicing : Fast-db (Paris)GSHG0013224
Alternative Splicing GalleryENSG00000132589
Gene ExpressionFLOT2 [ NCBI-GEO ]   FLOT2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14254 (SRS) Q14254 (Uniprot)
NextProtQ14254
With graphics : InterProQ14254
Splice isoforms : SwissVarQ14254(Swissvar)
Domains : Interpro (SRS)Band_7   
Domains : Interpro (EBI)Band_7   
Related proteins : CluSTrQ14254
Domain families : Pfam (SRS)Band_7 (PF01145)   
Domain families : Pfam (Sanger)Band_7 (PF01145)   
Domain families : Pfam (NCBI)pfam01145   
Domain families : Smart (EMBL)PHB (SM00244)  
DMDM2319
Blocks (Seattle)Q14254
Human Protein AtlasENSG00000132589
HPRD00580
IPIIPI00789008   IPI00795979   
Protein Interaction databases
DIP (DOE-UCLA)Q14254
IntAct (EBI)Q14254
FunCoupENSG00000132589
REACTOMEFLOT2
Protein Interaction Database2319
BioGRIDFLOT2
InParanoidQ14254
Interologous Interaction database Q14254
IntegromeDBFLOT2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)FLOT2
SNP (GeneSNP Utah)FLOT2
SNP : HGBaseFLOT2
Genetic variants : HAPMAPFLOT2
Somatic Mutations in Cancer : COSMICFLOT2 
CONAN: Copy Number AnalysisFLOT2 
Mutations and Diseases : HGMDFLOT2
OMIM131560   
GENETests131560   
Disease Genetic AssociationFLOT2
Huge Navigator FLOT2 [HugePedia]  FLOT2 [HugeCancerGEM]
Genomic VariantsFLOT2  FLOT2 [DGVbeta]
snp3D : Map Gene to Disease2319
General knowledge
Homologs : HomoloGeneFLOT2
Homology/Alignments : Family Browser (UCSC)FLOT2
Phylogenetic Trees/Animal Genes : TreeFamFLOT2
Chemical/Protein Interactions : CTD2319
Chemical/Pharm GKB GenePA28176
Clinical trialFLOT2
Cancer Resource (Charite)ENSG00000132589
Ontology : AmiGOacrosomal membrane  endosome  plasma membrane  cell adhesion  epidermis development  cell surface  flotillin complex  endocytic vesicle  
Ontology : EGO-EBIacrosomal membrane  endosome  plasma membrane  cell adhesion  epidermis development  cell surface  flotillin complex  endocytic vesicle  
Pathways : KEGGInsulin signaling pathway
Other databases
Probes
Litterature
PubMed47 Pubmed reference(s) in Entrez
PubGeneFLOT2
iHOPFLOT2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:30:08 CEST 2013
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