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FLYWCH2 (FLYWCH family member 2)

Identity

Other alias-
HGNC (Hugo) FLYWCH2
LocusID (NCBI) 114984
Atlas_Id 63544
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 2883195 and ends at 2899382 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FLYWCH2   25178
Cards
Entrez_Gene (NCBI)FLYWCH2  114984  FLYWCH family member 2
Aliases
GeneCards (Weizmann)FLYWCH2
Ensembl hg19 (Hinxton)ENSG00000162076 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162076 [Gene_View]  chr16:2883195-2899382 [Contig_View]  FLYWCH2 [Vega]
ICGC DataPortalENSG00000162076
TCGA cBioPortalFLYWCH2
AceView (NCBI)FLYWCH2
Genatlas (Paris)FLYWCH2
WikiGenes114984
SOURCE (Princeton)FLYWCH2
Genetics Home Reference (NIH)FLYWCH2
Genomic and cartography
GoldenPath hg38 (UCSC)FLYWCH2  -     chr16:2883195-2899382 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FLYWCH2  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblFLYWCH2 - 16p13.3 [CytoView hg19]  FLYWCH2 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIFLYWCH2 [Mapview hg19]  FLYWCH2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL542248 BC014089 BG120460 BI825861 CA413438
RefSeq transcript (Entrez)NM_001142499 NM_001142500 NM_138439
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FLYWCH2
Cluster EST : UnigeneHs.534525 [ NCBI ]
CGAP (NCI)Hs.534525
Alternative Splicing GalleryENSG00000162076
Gene ExpressionFLYWCH2 [ NCBI-GEO ]   FLYWCH2 [ EBI - ARRAY_EXPRESS ]   FLYWCH2 [ SEEK ]   FLYWCH2 [ MEM ]
Gene Expression Viewer (FireBrowse)FLYWCH2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114984
GTEX Portal (Tissue expression)FLYWCH2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96CP2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96CP2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96CP2
Splice isoforms : SwissVarQ96CP2
PhosPhoSitePlusQ96CP2
Domains : Interpro (EBI)FLYWCH_N   
Domain families : Pfam (Sanger)FLYWCH_N (PF15423)   
Domain families : Pfam (NCBI)pfam15423   
Conserved Domain (NCBI)FLYWCH2
DMDM Disease mutations114984
Blocks (Seattle)FLYWCH2
SuperfamilyQ96CP2
Human Protein AtlasENSG00000162076
Peptide AtlasQ96CP2
HPRD14007
IPIIPI00060521   
Protein Interaction databases
DIP (DOE-UCLA)Q96CP2
IntAct (EBI)Q96CP2
FunCoupENSG00000162076
BioGRIDFLYWCH2
STRING (EMBL)FLYWCH2
ZODIACFLYWCH2
Ontologies - Pathways
QuickGOQ96CP2
Ontology : AmiGORNA binding  cellular_component  biological_process  
Ontology : EGO-EBIRNA binding  cellular_component  biological_process  
NDEx NetworkFLYWCH2
Atlas of Cancer Signalling NetworkFLYWCH2
Wikipedia pathwaysFLYWCH2
Orthology - Evolution
OrthoDB114984
GeneTree (enSembl)ENSG00000162076
Phylogenetic Trees/Animal Genes : TreeFamFLYWCH2
HOVERGENQ96CP2
HOGENOMQ96CP2
Homologs : HomoloGeneFLYWCH2
Homology/Alignments : Family Browser (UCSC)FLYWCH2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFLYWCH2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FLYWCH2
dbVarFLYWCH2
ClinVarFLYWCH2
1000_GenomesFLYWCH2 
Exome Variant ServerFLYWCH2
ExAC (Exome Aggregation Consortium)FLYWCH2 (select the gene name)
Genetic variants : HAPMAP114984
Genomic Variants (DGV)FLYWCH2 [DGVbeta]
DECIPHERFLYWCH2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFLYWCH2 
Mutations
ICGC Data PortalFLYWCH2 
TCGA Data PortalFLYWCH2 
Broad Tumor PortalFLYWCH2
OASIS PortalFLYWCH2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFLYWCH2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFLYWCH2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FLYWCH2
DgiDB (Drug Gene Interaction Database)FLYWCH2
DoCM (Curated mutations)FLYWCH2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FLYWCH2 (select a term)
intoGenFLYWCH2
Cancer3DFLYWCH2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFLYWCH2
Genetic Testing Registry FLYWCH2
NextProtQ96CP2 [Medical]
TSGene114984
GENETestsFLYWCH2
Target ValidationFLYWCH2
Huge Navigator FLYWCH2 [HugePedia]
snp3D : Map Gene to Disease114984
BioCentury BCIQFLYWCH2
ClinGenFLYWCH2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114984
Chemical/Pharm GKB GenePA162388745
Clinical trialFLYWCH2
Miscellaneous
canSAR (ICR)FLYWCH2 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFLYWCH2
EVEXFLYWCH2
GoPubMedFLYWCH2
iHOPFLYWCH2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:49:42 CEST 2017

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