Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FMR1-AS1 (FMR1 antisense RNA 1)

Identity

Alias_namesFMR1AS
FMR1-AS
FMR1 antisense RNA (non-protein coding)
FMR1 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)ASFMR1
FMR4
Other alias
HGNC (Hugo) FMR1-AS1
LocusID (NCBI) 100126270
Atlas_Id 63548
Location Xq27.3  [Link to chromosome band Xq27]
Location_base_pair Starts at 147909431 and ends at 147911817 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ECHDC2 (1p32.3) / FMR1-AS1 (Xq27.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FMR1-AS1   39081
Cards
Entrez_Gene (NCBI)FMR1-AS1  100126270  FMR1 antisense RNA 1
AliasesASFMR1; FMR1-AS; FMR1AS; FMR4
GeneCards (Weizmann)FMR1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:147909431-147911817 [Contig_View]  FMR1-AS1 [Vega]
TCGA cBioPortalFMR1-AS1
AceView (NCBI)FMR1-AS1
Genatlas (Paris)FMR1-AS1
WikiGenes100126270
SOURCE (Princeton)FMR1-AS1
Genetics Home Reference (NIH)FMR1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FMR1-AS1  -     chrX:147909431-147911817 -  Xq27.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FMR1-AS1  -     Xq27.3   [Description]    (hg19-Feb_2009)
EnsemblFMR1-AS1 - Xq27.3 [CytoView hg19]  FMR1-AS1 - Xq27.3 [CytoView hg38]
Mapping of homologs : NCBIFMR1-AS1 [Mapview hg19]  FMR1-AS1 [Mapview hg38]
OMIM300805   
Gene and transcription
Genbank (Entrez)EU048200 EU048201 EU048202 EU048203 EU048204
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FMR1-AS1
Cluster EST : UnigeneHs.561999 [ NCBI ]
CGAP (NCI)Hs.561999
Gene ExpressionFMR1-AS1 [ NCBI-GEO ]   FMR1-AS1 [ EBI - ARRAY_EXPRESS ]   FMR1-AS1 [ SEEK ]   FMR1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FMR1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100126270
GTEX Portal (Tissue expression)FMR1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FMR1-AS1
DMDM Disease mutations100126270
Blocks (Seattle)FMR1-AS1
IPIIPI00878860   
Protein Interaction databases
BioGRIDFMR1-AS1
STRING (EMBL)FMR1-AS1
ZODIACFMR1-AS1
Ontologies - Pathways
Huge Navigator FMR1-AS1 [HugePedia]
snp3D : Map Gene to Disease100126270
BioCentury BCIQFMR1-AS1
ClinGenFMR1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100126270
Clinical trialFMR1-AS1
Miscellaneous
canSAR (ICR)FMR1-AS1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFMR1-AS1
EVEXFMR1-AS1
GoPubMedFMR1-AS1
iHOPFMR1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:12:40 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.