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FNDC1 (fibronectin type III domain containing 1)

Identity

Alias (NCBI)AGS8
FNDC2
MEL4B3
bA243O10.1
dJ322A24.1
HGNC (Hugo) FNDC1
HGNC Alias symbbA243O10.1
KIAA1866
dJ322A24.1
HGNC Previous nameFNDC2
HGNC Previous namefibronectin type III domain containing 2
LocusID (NCBI) 84624
Atlas_Id 45579
Location 6q25.3  [Link to chromosome band 6q25]
Location_base_pair Starts at 159169400 and ends at 159272108 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MAP3K4 (6q26) / FNDC1 (6q25.3)MAP3K4 6q26 / FNDC1 6q25.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)FNDC1   21184
Cards
Entrez_Gene (NCBI)FNDC1    fibronectin type III domain containing 1
AliasesAGS8; FNDC2; MEL4B3; bA243O10.1; 
dJ322A24.1
GeneCards (Weizmann)FNDC1
Ensembl hg19 (Hinxton)ENSG00000164694 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164694 [Gene_View]  ENSG00000164694 [Sequence]  chr6:159169400-159272108 [Contig_View]  FNDC1 [Vega]
ICGC DataPortalENSG00000164694
TCGA cBioPortalFNDC1
AceView (NCBI)FNDC1
Genatlas (Paris)FNDC1
SOURCE (Princeton)FNDC1
Genetics Home Reference (NIH)FNDC1
Genomic and cartography
GoldenPath hg38 (UCSC)FNDC1  -     chr6:159169400-159272108 +  6q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FNDC1  -     6q25.3   [Description]    (hg19-Feb_2009)
GoldenPathFNDC1 - 6q25.3 [CytoView hg19]  FNDC1 - 6q25.3 [CytoView hg38]
ImmunoBaseENSG00000164694
Genome Data Viewer NCBIFNDC1 [Mapview hg19]  
OMIM609991   
Gene and transcription
Genbank (Entrez)AB058769 AJ586132 AK127635 AL832410 BC146783
RefSeq transcript (Entrez)NM_032532
Consensus coding sequences : CCDS (NCBI)FNDC1
Gene ExpressionFNDC1 [ NCBI-GEO ]   FNDC1 [ EBI - ARRAY_EXPRESS ]   FNDC1 [ SEEK ]   FNDC1 [ MEM ]
Gene Expression Viewer (FireBrowse)FNDC1 [ Firebrowse - Broad ]
GenevisibleExpression of FNDC1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84624
GTEX Portal (Tissue expression)FNDC1
Human Protein AtlasENSG00000164694-FNDC1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FNDC1
Human Protein Atlas [tissue]ENSG00000164694-FNDC1 [tissue]
HPRD13547
Protein Interaction databases
BioGRIDFNDC1
STRING (EMBL)FNDC1
ZODIACFNDC1
Ontologies - Pathways
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFNDC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:09:43 CEST 2021

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