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FNDC3A (fibronectin type III domain containing 3A)

Identity

Alias (NCBI)FNDC3
HUGO
bA203I16.1
bA203I16.5
HGNC (Hugo) FNDC3A
HGNC Alias symbbA203I16.5
KIAA0970
HGNC Previous nameFNDC3
HGNC Previous namefibronectin type III domain containing 3
LocusID (NCBI) 22862
Atlas_Id 63550
Location 13q14.2  [Link to chromosome band 13q14]
Location_base_pair Starts at 49110317 and ends at 49209779 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCNB1 (5q13.2) / FNDC3A (13q14.2)FNDC3A (13q14.2) / ESD (13q14.2)FNDC3A (13q14.2) / MTHFD2 (2p13.1)
FNDC3A (13q14.2) / PHF11 (13q14.2)FNDC3A (13q14.2) / PSG3 (19q13.2)FNDC3A (13q14.2) / RB1 (13q14.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(13;13)(q14;q14) RB1/FNDC3A
t(13;13)(q14;q14) RB1/FNDC3A


External links

Nomenclature
HGNC (Hugo)FNDC3A   20296
Cards
Entrez_Gene (NCBI)FNDC3A    fibronectin type III domain containing 3A
AliasesFNDC3; HUGO; bA203I16.1; bA203I16.5
GeneCards (Weizmann)FNDC3A
Ensembl hg19 (Hinxton)ENSG00000102531 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102531 [Gene_View]  ENSG00000102531 [Sequence]  chr13:49110317-49209779 [Contig_View]  FNDC3A [Vega]
ICGC DataPortalENSG00000102531
TCGA cBioPortalFNDC3A
AceView (NCBI)FNDC3A
Genatlas (Paris)FNDC3A
SOURCE (Princeton)FNDC3A
Genetics Home Reference (NIH)FNDC3A
Genomic and cartography
GoldenPath hg38 (UCSC)FNDC3A  -     chr13:49110317-49209779 +  13q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FNDC3A  -     13q14.2   [Description]    (hg19-Feb_2009)
GoldenPathFNDC3A - 13q14.2 [CytoView hg19]  FNDC3A - 13q14.2 [CytoView hg38]
ImmunoBaseENSG00000102531
genome Data Viewer NCBIFNDC3A [Mapview hg19]  
OMIM615794   
Gene and transcription
Genbank (Entrez)AB023187 AJ749706 AJ749707 AK001140 AK056071
RefSeq transcript (Entrez)NM_001079673 NM_001278438 NM_014923
Consensus coding sequences : CCDS (NCBI)FNDC3A
Alternative Splicing GalleryENSG00000102531
Gene ExpressionFNDC3A [ NCBI-GEO ]   FNDC3A [ EBI - ARRAY_EXPRESS ]   FNDC3A [ SEEK ]   FNDC3A [ MEM ]
Gene Expression Viewer (FireBrowse)FNDC3A [ Firebrowse - Broad ]
GenevisibleExpression of FNDC3A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22862
GTEX Portal (Tissue expression)FNDC3A
Human Protein AtlasENSG00000102531-FNDC3A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FNDC3A
Human Protein Atlas [tissue]ENSG00000102531-FNDC3A [tissue]
HPRD13548
Protein Interaction databases
BioGRIDFNDC3A
STRING (EMBL)FNDC3A
ZODIACFNDC3A
Ontologies - Pathways
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFNDC3A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Sep 15 22:57:09 CEST 2021

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