| Nomenclature | | HGNC (Hugo) | FOXG1 3811 |
| Entrez_Gene (NCBI) | FOXG1 2290 forkhead box G1 |
| Cards | | GeneCards (Weizmann) | FOXG1 |
| Ensembl (Hinxton) | ENSG00000176165 [Gene_View] chr14:29236278-29239483 [Contig_View] FOXG1 [Vega] |
| AceView (NCBI) | FOXG1 |
| Genatlas (Paris) | FOXG1 |
| SOURCE (Stanford) | NM_005249 |
| Genomic and cartography | | GoldenPath (UCSC) | FOXG1 - 14q12 chr14:29236278-29239483 + 14q12 [Description] (hg19-Feb_2009) |
| Ensembl | FOXG1 - 14q12 [CytoView] |
| Mapping of homologs : NCBI | FOXG1 [Mapview] |
| OMIM | 164874 613454 |
| Gene and transcription |
| Genbank (Entrez) | BC035020 BC040960 BC050072 DR001113 U44097 |
| RefSeq transcript (SRS) | NM_005249 |
| RefSeq transcript (Entrez) | NM_005249 |
| RefSeq genomic (SRS) | AC_000146 NC_000014 NC_018925 NG_009367 NT_026437 NW_001838110 NW_004078079 |
| RefSeq genomic (Entrez) | AC_000146 NC_000014 NC_018925 NG_009367 NT_026437 NW_001838110 NW_004078079 |
| Consensus coding sequences : CCDS (NCBI) | FOXG1 |
| Cluster EST : Unigene | Hs.741222 [ SRS ] Hs.741222 [ NCBI ] |
| CGAP (NCI) | Hs.741222 |
| Alternative Splicing : Fast-db (Paris) | GSHG0008759 |
| Alternative Splicing Gallery | ENSG00000176165 |
| Gene Expression | FOXG1 [ NCBI-GEO ] FOXG1 [ EBI - ARRAY_EXPRESS ] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | P55316 (SRS) P55316 (Uniprot) |
| NextProt | P55316 |
| With graphics : InterPro | P55316 |
| Splice isoforms : SwissVar | P55316(Swissvar) |
| Domaine pattern : Prosite (SRS) | FORK_HEAD_1 (PS00657) FORK_HEAD_2 (PS00658) FORK_HEAD_3 (PS50039) |
| Domaine pattern : Prosite (Expaxy) | FORK_HEAD_1 (PS00657) FORK_HEAD_2 (PS00658) FORK_HEAD_3 (PS50039) |
| Domains : Interpro (SRS) | TF_fork_head TF_fork_head_CS WHTH_DNA-bd_dom |
| Domains : Interpro (EBI) | TF_fork_head TF_fork_head_CS WHTH_DNA-bd_dom |
| Related proteins : CluSTr | P55316 |
| Domain families : Pfam (SRS) | Fork_head (PF00250) |
| Domain families : Pfam (Sanger) | Fork_head (PF00250) |
| Domain families : Pfam (NCBI) | pfam00250 |
| Domain families : Smart (EMBL) | FH (SM00339) |
| DMDM | 2290 |
| Blocks (Seattle) | P55316 |
| Human Protein Atlas | ENSG00000176165 |
| HPRD | 01283 |
| IPI | IPI00024386 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | P55316 |
| IntAct (EBI) | P55316 |
| FunCoup | ENSG00000176165 |
| REACTOME | FOXG1 |
| Protein Interaction Database | 2290 |
| BioGRID | FOXG1 |
| InParanoid | P55316 |
| Interologous Interaction database | P55316 |
| IntegromeDB | FOXG1 |
| Polymorphism : SNP, mutations, diseases | | SNP Single Nucleotide Polymorphism (NCBI) | FOXG1 |
| SNP (GeneSNP Utah) | FOXG1 |
| SNP : HGBase | FOXG1 |
| Genetic variants : HAPMAP | FOXG1 |
| Somatic Mutations in Cancer : COSMIC | FOXG1 |
| CONAN: Copy Number Analysis | FOXG1 |
| Mutations and Diseases : HGMD | FOXG1 |
| OMIM | 164874 613454 |
| GENETests | 164874 613454 |
| Disease Genetic Association | FOXG1 |
| Huge Navigator |
FOXG1 [HugePedia] FOXG1 [HugeCancerGEM] |
| Genomic Variants | FOXG1 FOXG1 [DGVbeta] |
| ClinVar | FOXG1 |
| snp3D : Map Gene to Disease | 2290 |
| General knowledge |
|---|
| Homologs : HomoloGene | FOXG1 |
| Homology/Alignments : Family Browser (UCSC) | FOXG1 |
| Phylogenetic Trees/Animal Genes : TreeFam | FOXG1 |
| Chemical/Protein Interactions : CTD | 2290 |
| Chemical/Pharm GKB Gene | PA162388806 |
| Clinical trial | FOXG1 |
| Cancer Resource (Charite) | ENSG00000176165 |
| Ontology : AmiGO | positive regulation of neuroblast proliferation DNA binding double-stranded DNA binding RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity protein binding nucleus transcription factor complex regulation of transcription, DNA-dependent regulation of mitotic cell cycle brain development aging transcription factor binding DNA binding, bending embryo development ending in birth or egg hatching tissue development dorsal/ventral pattern formation axon midline choice point recognition central nervous system neuron development forebrain development hindbrain development nonmotile primary cilium assembly inner ear morphogenesis sequence-specific DNA binding nose development negative regulation of neuron differentiation positive regulation of cell cycle negative regulation of transcription, DNA-dependent positive regulation of transcription from RNA polymerase II promoter regulation of sequence-specific DNA binding transcription factor activity |
| Ontology : EGO-EBI | positive regulation of neuroblast proliferation DNA binding double-stranded DNA binding RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity protein binding nucleus transcription factor complex regulation of transcription, DNA-dependent regulation of mitotic cell cycle brain development aging transcription factor binding DNA binding, bending embryo development ending in birth or egg hatching tissue development dorsal/ventral pattern formation axon midline choice point recognition central nervous system neuron development forebrain development hindbrain development nonmotile primary cilium assembly inner ear morphogenesis sequence-specific DNA binding nose development negative regulation of neuron differentiation positive regulation of cell cycle negative regulation of transcription, DNA-dependent positive regulation of transcription from RNA polymerase II promoter regulation of sequence-specific DNA binding transcription factor activity |
| Other databases |
| Probes |
|---|
| Litterature | | PubMed | 45 Pubmed reference(s) in Entrez |
| PubGene | FOXG1 |
| iHOP | FOXG1 |
