FOXJ2 (forkhead box J2)

Identity

Other names	FHX
HGNC	FOXJ2
Location	12p13.31
Location_base_pair	Starts at 8076626 and ends at 8099385 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	FOXJ2   24818
Entrez_Gene	FOXJ2  55810  forkhead box J2
	Cards
GeneCards	FOXJ2
Ensembl	FOXJ2 [Search_View]   ENSG00000065970 [Gene_View]
Genatlas	FOXJ2
GeneLynx	FOXJ2
eGenome	FOXJ2
euGene	55810
	Genomic and cartography
GoldenPath	FOXJ2  -  12p13.31   chr12:8076626-8099385 +  12p13.31   [Description]    (hg18-March_2006)
Ensembl	FOXJ2 - 12p13.31 [CytoView]
NCBI	Mapview
HomoloGene	FOXJ2
	Gene and transcription
Genbank	AF038177 [ ENTREZ ]
Genbank	AF155132 [ ENTREZ ]
Genbank	AF155133 [ ENTREZ ]
Genbank	AK092529 [ ENTREZ ]
Genbank	AL161978 [ ENTREZ ]
RefSeq	NM_018416 [ SRS ]    NM_018416 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009714 [ SRS ]    NT_009714 [ ENTREZ ]
RefSeq	NW_001838051 [ SRS ]    NW_001838051 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	FOXJ2 AceView - NCBI
Unigene	Hs.120844 [ SRS ]    Hs.120844 [ NCBI ]     HS120844 [ spliceNest ]
Fast-db	1910 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9P0K8 [ SRS]    Q9P0K8 [ EXPASY ]     Q9P0K8 [ INTERPRO ]     Q9P0K8 [ UNIPROT ]
Prosite	PS00657 FORK_HEAD_1 [ SRS ]    PS00657 FORK_HEAD_1 [ Expasy ]
Prosite	PS00658 FORK_HEAD_2 [ SRS ]    PS00658 FORK_HEAD_2 [ Expasy ]
Prosite	PS50039 FORK_HEAD_3 [ SRS ]    PS50039 FORK_HEAD_3 [ Expasy ]
Interpro	IPR001766 TF_Fork_head [ SRS ]    IPR001766 TF_Fork_head [ EBI ]
Interpro	IPR011991 Wing_hlx_DNA_bd [ SRS ]    IPR011991 Wing_hlx_DNA_bd [ EBI ]
CluSTr	Q9P0K8
Pfam	PF00250 Fork_head [ SRS ]    PF00250 Fork_head [ Sanger ]    pfam00250 [ NCBI-CDD ]
Smart	SM00339 FH [EMBL]
Prodom	PD000425 TF_Fork_head[INRA-Toulouse]
Prodom	Q9P0K8 FOXJ2_HUMAN [ Domain structure ]   Q9P0K8 FOXJ2_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q9P0K8
HPRD	17014
	Protein Interaction databases
DIP	Q9P0K8
IntAct	Q9P0K8
	Polymorphism : SNP, mutations, diseases
SNP	FOXJ2 [dbSNP-NCBI]
SNP	NM_018416 [SNP-NCI]
SNP	FOXJ2 [GeneSNPs - Utah]  FOXJ2] [HGBASE - SRS]
HAPMAP	FOXJ2 [HAPMAP]
COSMIC	FOXJ2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	FOXJ2
	General knowledge
Family Browser	FOXJ2 [UCSC Family Browser]
SOURCE	NM_018416
SMD	Hs.120844
SAGE	Hs.120844
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
PubGene	FOXJ2
TreeFam	FOXJ2
CTD	55810 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FOXJ2 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:42:00 2008