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FOXN3-AS1 (FOXN3 antisense RNA 1)

Identity

Alias_namesFOXN3 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) FOXN3-AS1
LocusID (NCBI) 400236
Atlas_Id 63571
Location 14q32.11  [Link to chromosome band 14q32]
Location_base_pair Starts at 89417354 and ends at 89419793 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FOXN3-AS1   44290
Cards
Entrez_Gene (NCBI)FOXN3-AS1  400236  FOXN3 antisense RNA 1
Aliases
GeneCards (Weizmann)FOXN3-AS1
Ensembl hg19 (Hinxton)ENSG00000258920 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258920 [Gene_View]  chr14:89417354-89419793 [Contig_View]  FOXN3-AS1 [Vega]
ICGC DataPortalENSG00000258920
TCGA cBioPortalFOXN3-AS1
AceView (NCBI)FOXN3-AS1
Genatlas (Paris)FOXN3-AS1
WikiGenes400236
SOURCE (Princeton)FOXN3-AS1
Genetics Home Reference (NIH)FOXN3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FOXN3-AS1  -     chr14:89417354-89419793 +  14q32.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FOXN3-AS1  -     14q32.11   [Description]    (hg19-Feb_2009)
EnsemblFOXN3-AS1 - 14q32.11 [CytoView hg19]  FOXN3-AS1 - 14q32.11 [CytoView hg38]
Mapping of homologs : NCBIFOXN3-AS1 [Mapview hg19]  FOXN3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC067103
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FOXN3-AS1
Cluster EST : UnigeneHs.585207 [ NCBI ]
CGAP (NCI)Hs.585207
Alternative Splicing GalleryENSG00000258920
Gene ExpressionFOXN3-AS1 [ NCBI-GEO ]   FOXN3-AS1 [ EBI - ARRAY_EXPRESS ]   FOXN3-AS1 [ SEEK ]   FOXN3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FOXN3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400236
GTEX Portal (Tissue expression)FOXN3-AS1
Human Protein AtlasENSG00000258920-FOXN3-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FOXN3-AS1
DMDM Disease mutations400236
Blocks (Seattle)FOXN3-AS1
Human Protein Atlas [tissue]ENSG00000258920-FOXN3-AS1 [tissue]
IPIIPI00977427   
Protein Interaction databases
FunCoupENSG00000258920
BioGRIDFOXN3-AS1
STRING (EMBL)FOXN3-AS1
ZODIACFOXN3-AS1
Ontologies - Pathways
Huge Navigator FOXN3-AS1 [HugePedia]
snp3D : Map Gene to Disease400236
BioCentury BCIQFOXN3-AS1
ClinGenFOXN3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400236
Clinical trialFOXN3-AS1
Miscellaneous
canSAR (ICR)FOXN3-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFOXN3-AS1
EVEXFOXN3-AS1
GoPubMedFOXN3-AS1
iHOPFOXN3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:29:29 CET 2017

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