Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FOXP4-AS1 (FOXP4 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) FOXP4-AS1
LocusID (NCBI) 101060264
Atlas_Id 56801
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 41523895 and ends at 41546243 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FOXP4-AS1   50332
Cards
Entrez_Gene (NCBI)FOXP4-AS1  101060264  FOXP4 antisense RNA 1
Aliases
GeneCards (Weizmann)FOXP4-AS1
Ensembl hg19 (Hinxton)ENSG00000234753 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234753 [Gene_View]  ENSG00000234753 [Sequence]  chr6:41523895-41546243 [Contig_View]  FOXP4-AS1 [Vega]
ICGC DataPortalENSG00000234753
TCGA cBioPortalFOXP4-AS1
AceView (NCBI)FOXP4-AS1
Genatlas (Paris)FOXP4-AS1
WikiGenes101060264
SOURCE (Princeton)FOXP4-AS1
Genetics Home Reference (NIH)FOXP4-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FOXP4-AS1  -     chr6:41523895-41546243 -  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FOXP4-AS1  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblFOXP4-AS1 - 6p21.1 [CytoView hg19]  FOXP4-AS1 - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBIFOXP4-AS1 [Mapview hg19]  FOXP4-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF194903 BG028463 BQ082169 BQ128057 BQ581966
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FOXP4-AS1
Cluster EST : UnigeneHs.571099 [ NCBI ]
CGAP (NCI)Hs.571099
Alternative Splicing GalleryENSG00000234753
Gene ExpressionFOXP4-AS1 [ NCBI-GEO ]   FOXP4-AS1 [ EBI - ARRAY_EXPRESS ]   FOXP4-AS1 [ SEEK ]   FOXP4-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FOXP4-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101060264
GTEX Portal (Tissue expression)FOXP4-AS1
Human Protein AtlasENSG00000234753-FOXP4-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FOXP4-AS1
DMDM Disease mutations101060264
Blocks (Seattle)FOXP4-AS1
Human Protein Atlas [tissue]ENSG00000234753-FOXP4-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000234753
BioGRIDFOXP4-AS1
STRING (EMBL)FOXP4-AS1
ZODIACFOXP4-AS1
Ontologies - Pathways
Huge Navigator FOXP4-AS1 [HugePedia]
snp3D : Map Gene to Disease101060264
BioCentury BCIQFOXP4-AS1
ClinGenFOXP4-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101060264
Clinical trialFOXP4-AS1
Miscellaneous
canSAR (ICR)FOXP4-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFOXP4-AS1
EVEXFOXP4-AS1
GoPubMedFOXP4-AS1
iHOPFOXP4-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:07:12 CET 2018

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