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FP248 (Putative chemokine-related protein FP248)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 101930072
Atlas_Id 77070
Location 8_KI270819v1_alt  [Link to chromosome band 8]
Location_base_pair Starts at 107001 and ends at 110410 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)FP248  101930072  Putative chemokine-related protein FP248
Aliases
GeneCards (Weizmann)FP248
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8_KI270819v1_alt:107001-110410 [Contig_View]  FP248 [Vega]
TCGA cBioPortalFP248
AceView (NCBI)FP248
Genatlas (Paris)FP248
WikiGenes101930072
SOURCE (Princeton)FP248
Genetics Home Reference (NIH)FP248
Genomic and cartography
GoldenPath hg38 (UCSC)FP248  -     chr8_KI270819v1_alt:107001-110410 +  8_KI270819v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FP248  -     8_KI270819v1_alt   [Description]    (hg19-Feb_2009)
EnsemblFP248 - 8_KI270819v1_alt [CytoView hg19]  FP248 - 8_KI270819v1_alt [CytoView hg38]
Mapping of homologs : NCBIFP248 [Mapview hg19]  FP248 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF370371
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_018919 NT_187574
Consensus coding sequences : CCDS (NCBI)FP248
Cluster EST : UnigeneHs.626164 [ NCBI ]
CGAP (NCI)Hs.626164
Gene ExpressionFP248 [ NCBI-GEO ]   FP248 [ EBI - ARRAY_EXPRESS ]   FP248 [ SEEK ]   FP248 [ MEM ]
Gene Expression Viewer (FireBrowse)FP248 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101930072
GTEX Portal (Tissue expression)FP248
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ71RG6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ71RG6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ71RG6
Splice isoforms : SwissVarQ71RG6
PhosPhoSitePlusQ71RG6
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FP248
DMDM Disease mutations101930072
Blocks (Seattle)FP248
SuperfamilyQ71RG6
Peptide AtlasQ71RG6
Protein Interaction databases
DIP (DOE-UCLA)Q71RG6
IntAct (EBI)Q71RG6
BioGRIDFP248
STRING (EMBL)FP248
ZODIACFP248
Ontologies - Pathways
QuickGOQ71RG6
Ontology : AmiGOextracellular region  
Ontology : EGO-EBIextracellular region  
NDEx NetworkFP248
Atlas of Cancer Signalling NetworkFP248
Wikipedia pathwaysFP248
Orthology - Evolution
OrthoDB101930072
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ71RG6
HOGENOMQ71RG6
Homologs : HomoloGeneFP248
Homology/Alignments : Family Browser (UCSC)FP248
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFP248 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FP248
dbVarFP248
ClinVarFP248
1000_GenomesFP248 
Exome Variant ServerFP248
ExAC (Exome Aggregation Consortium)FP248 (select the gene name)
Genetic variants : HAPMAP101930072
Genomic Variants (DGV)FP248 [DGVbeta]
DECIPHERFP248 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFP248 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch FP248
DgiDB (Drug Gene Interaction Database)FP248
DoCM (Curated mutations)FP248 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FP248 (select a term)
intoGenFP248
Cancer3DFP248(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFP248
Genetic Testing Registry FP248
NextProtQ71RG6 [Medical]
TSGene101930072
GENETestsFP248
Target ValidationFP248
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease101930072
BioCentury BCIQFP248
ClinGenFP248
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101930072
Clinical trialFP248
Miscellaneous
canSAR (ICR)FP248 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFP248
EVEXFP248
GoPubMedFP248
iHOPFP248
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:49:50 CEST 2017

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