Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FRG1-DT (FRG1 divergent transcript)

Identity

Other alias-
HGNC (Hugo) FRG1-DT
LocusID (NCBI) 728339
Atlas_Id 79549
Location 4_KI270925v1_alt  [Link to chromosome band 4]
Location_base_pair Starts at 512188 and ends at 513516 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)FRG1-DT   51590
Cards
Entrez_Gene (NCBI)FRG1-DT  728339  FRG1 divergent transcript
Aliases
GeneCards (Weizmann)FRG1-DT
Ensembl hg19 (Hinxton)ENSG00000245685 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245685 [Gene_View]  chr4_KI270925v1_alt:512188-513516 [Contig_View]  FRG1-DT [Vega]
ICGC DataPortalENSG00000245685
TCGA cBioPortalFRG1-DT
AceView (NCBI)FRG1-DT
Genatlas (Paris)FRG1-DT
WikiGenes728339
SOURCE (Princeton)FRG1-DT
Genetics Home Reference (NIH)FRG1-DT
Genomic and cartography
GoldenPath hg38 (UCSC)FRG1-DT  -     chr4_KI270925v1_alt:512188-513516 -  4_KI270925v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FRG1-DT  -     4_KI270925v1_alt   [Description]    (hg19-Feb_2009)
EnsemblFRG1-DT - 4_KI270925v1_alt [CytoView hg19]  FRG1-DT - 4_KI270925v1_alt [CytoView hg38]
Mapping of homologs : NCBIFRG1-DT [Mapview hg19]  FRG1-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC087857
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_187543 NT_187650 NT_187679 NW_015495301
Consensus coding sequences : CCDS (NCBI)FRG1-DT
Cluster EST : UnigeneHs.98902 [ NCBI ]
CGAP (NCI)Hs.98902
Alternative Splicing GalleryENSG00000245685
Gene ExpressionFRG1-DT [ NCBI-GEO ]   FRG1-DT [ EBI - ARRAY_EXPRESS ]   FRG1-DT [ SEEK ]   FRG1-DT [ MEM ]
Gene Expression Viewer (FireBrowse)FRG1-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728339
GTEX Portal (Tissue expression)FRG1-DT
Human Protein AtlasENSG00000245685-FRG1-DT [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FRG1-DT
DMDM Disease mutations728339
Blocks (Seattle)FRG1-DT
Human Protein Atlas [tissue]ENSG00000245685-FRG1-DT [tissue]
Protein Interaction databases
FunCoupENSG00000245685
BioGRIDFRG1-DT
STRING (EMBL)FRG1-DT
ZODIACFRG1-DT
Ontologies - Pathways
Huge Navigator FRG1-DT [HugePedia]
snp3D : Map Gene to Disease728339
BioCentury BCIQFRG1-DT
ClinGenFRG1-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728339
Clinical trialFRG1-DT
Miscellaneous
canSAR (ICR)FRG1-DT (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFRG1-DT
EVEXFRG1-DT
GoPubMedFRG1-DT
iHOPFRG1-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:09:54 CET 2017

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