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FRG1CP (FSHD region gene 1 family member C, pseudogene)

Identity

Other alias-
HGNC (Hugo) FRG1CP
LocusID (NCBI) 100289097
Atlas_Id 78728
Location 20q11.1  [Link to chromosome band 20q11]
Location_base_pair Starts at 28580633 and ends at 28602665 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FRG1CP   51762
Cards
Entrez_Gene (NCBI)FRG1CP  100289097  FSHD region gene 1 family member C, pseudogene
Aliases
GeneCards (Weizmann)FRG1CP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:28580633-28602665 [Contig_View]  FRG1CP [Vega]
TCGA cBioPortalFRG1CP
AceView (NCBI)FRG1CP
Genatlas (Paris)FRG1CP
WikiGenes100289097
SOURCE (Princeton)FRG1CP
Genetics Home Reference (NIH)FRG1CP
Genomic and cartography
GoldenPath hg38 (UCSC)FRG1CP  -     chr20:28580633-28602665 -  20q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FRG1CP  -     20q11.1   [Description]    (hg19-Feb_2009)
EnsemblFRG1CP - 20q11.1 [CytoView hg19]  FRG1CP - 20q11.1 [CytoView hg38]
Mapping of homologs : NCBIFRG1CP [Mapview hg19]  FRG1CP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057099 AK307061 BC063132
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FRG1CP
Cluster EST : UnigeneHs.653099 [ NCBI ]
CGAP (NCI)Hs.653099
Gene ExpressionFRG1CP [ NCBI-GEO ]   FRG1CP [ EBI - ARRAY_EXPRESS ]   FRG1CP [ SEEK ]   FRG1CP [ MEM ]
Gene Expression Viewer (FireBrowse)FRG1CP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100289097
GTEX Portal (Tissue expression)FRG1CP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FRG1CP
DMDM Disease mutations100289097
Blocks (Seattle)FRG1CP
IPIIPI00936270   
Protein Interaction databases
BioGRIDFRG1CP
STRING (EMBL)FRG1CP
ZODIACFRG1CP
Ontologies - Pathways
Huge Navigator FRG1CP [HugePedia]
snp3D : Map Gene to Disease100289097
BioCentury BCIQFRG1CP
ClinGenFRG1CP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100289097
Clinical trialFRG1CP
Miscellaneous
canSAR (ICR)FRG1CP (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFRG1CP
EVEXFRG1CP
GoPubMedFRG1CP
iHOPFRG1CP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:30 CET 2017

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