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FRG1DP (FSHD region gene 1 family member D, pseudogene)

Identity

Other alias-
HGNC (Hugo) FRG1DP
LocusID (NCBI) 102723316
Atlas_Id 78150
Location 20q11.1  [Link to chromosome band 20q11]
Location_base_pair Starts at 29080390 and ends at 29096832 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FRG1DP   51763
Cards
Entrez_Gene (NCBI)FRG1DP  102723316  FSHD region gene 1 family member D, pseudogene
Aliases
GeneCards (Weizmann)FRG1DP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:29080390-29096832 [Contig_View]  FRG1DP [Vega]
TCGA cBioPortalFRG1DP
AceView (NCBI)FRG1DP
Genatlas (Paris)FRG1DP
WikiGenes102723316
SOURCE (Princeton)FRG1DP
Genetics Home Reference (NIH)FRG1DP
Genomic and cartography
GoldenPath hg38 (UCSC)FRG1DP  -     chr20:29080390-29096832 +  20q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FRG1DP  -     20q11.1   [Description]    (hg19-Feb_2009)
EnsemblFRG1DP - 20q11.1 [CytoView hg19]  FRG1DP - 20q11.1 [CytoView hg38]
Mapping of homologs : NCBIFRG1DP [Mapview hg19]  FRG1DP [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FRG1DP
Gene ExpressionFRG1DP [ NCBI-GEO ]   FRG1DP [ EBI - ARRAY_EXPRESS ]   FRG1DP [ SEEK ]   FRG1DP [ MEM ]
Gene Expression Viewer (FireBrowse)FRG1DP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102723316
GTEX Portal (Tissue expression)FRG1DP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FRG1DP
DMDM Disease mutations102723316
Blocks (Seattle)FRG1DP
Protein Interaction databases
BioGRIDFRG1DP
STRING (EMBL)FRG1DP
ZODIACFRG1DP
Ontologies - Pathways
Huge Navigator FRG1DP [HugePedia]
snp3D : Map Gene to Disease102723316
BioCentury BCIQFRG1DP
ClinGenFRG1DP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102723316
Clinical trialFRG1DP
Miscellaneous
canSAR (ICR)FRG1DP (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFRG1DP
EVEXFRG1DP
GoPubMedFRG1DP
iHOPFRG1DP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:30 CET 2017

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