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FRMD3 (FERM domain containing 3)

Identity

Other names4.1O
EPB41L4O
EPB41LO
P410
HGNC (Hugo) FRMD3
LocusID (NCBI) 257019
Location 9q21.32
Location_base_pair Starts at 85857905 and ends at 86153348 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)FRMD3   24125
Entrez_Gene (NCBI)FRMD3  257019  FERM domain containing 3
Cards
GeneCards (Weizmann)FRMD3
Ensembl (Hinxton)ENSG00000172159 [Gene_View]  chr9:85857905-86153348 [Contig_View]  FRMD3 [Vega]
AceView (NCBI)FRMD3
Genatlas (Paris)FRMD3
SOURCE (Stanford)NM_001244959 NM_001244960 NM_001244961 NM_001244962 NM_174938
Genomic and cartography
GoldenPath (UCSC)FRMD3  -  9q21.32   chr9:85857905-86153348 -  9q21.32   [Description]    (hg19-Feb_2009)
EnsemblFRMD3 - 9q21.32 [CytoView]
Mapping of homologs : NCBIFRMD3 [Mapview]
OMIM607619   
Gene and transcription
Genbank (Entrez)AK094281 AK223597 AK297722 AY137774 BC023560
RefSeq transcript (SRS)NM_001244959 NM_001244960 NM_001244961 NM_001244962 NM_174938
RefSeq transcript (Entrez)NM_001244959 NM_001244960 NM_001244961 NM_001244962 NM_174938
RefSeq genomic (SRS)AC_000141 NC_000009 NC_018920 NT_008470 NW_001839221 NW_004078058
RefSeq genomic (Entrez)AC_000141 NC_000009 NC_018920 NT_008470 NW_001839221 NW_004078058
Consensus coding sequences : CCDS (NCBI)FRMD3
Cluster EST : UnigeneHs.743606 [ SRS ] Hs.743606 [ NCBI ]
CGAP (NCI)Hs.743606
Alternative Splicing : Fast-db (Paris)GSHG0030908
Alternative Splicing GalleryENSG00000172159
Gene ExpressionFRMD3 [ NCBI-GEO ]   FRMD3 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2A2Y4 (SRS) A2A2Y4 (Uniprot)
NextProtA2A2Y4
With graphics : InterProA2A2Y4
Splice isoforms : SwissVarA2A2Y4(Swissvar)
Domaine pattern : Prosite (SRS)FERM_1 (PS00660)    FERM_2 (PS00661)    FERM_3 (PS50057)   
Domaine pattern : Prosite (Expaxy)FERM_1 (PS00660)    FERM_2 (PS00661)    FERM_3 (PS50057)   
Domains : Interpro (SRS)Band_41_domain    Band_41_fam    Ez/rad/moesin    FERM-adjacent    FERM/acyl-CoA-bd_prot_3-hlx    FERM_central    FERM_CS    FERM_domain    FERM_N    FERM_PH-like_C    PH_like_dom   
Domains : Interpro (EBI)Band_41_domain    Band_41_fam    Ez/rad/moesin    FERM-adjacent    FERM/acyl-CoA-bd_prot_3-hlx    FERM_central    FERM_CS    FERM_domain    FERM_N    FERM_PH-like_C    PH_like_dom   
Related proteins : CluSTrA2A2Y4
Domain families : Pfam (SRS)FA (PF08736)    FERM_C (PF09380)    FERM_M (PF00373)    FERM_N (PF09379)   
Domain families : Pfam (Sanger)FA (PF08736)    FERM_C (PF09380)    FERM_M (PF00373)    FERM_N (PF09379)   
Domain families : Pfam (NCBI)pfam08736    pfam09380    pfam00373    pfam09379   
Domain families : Smart (EMBL)B41 (SM00295)  
DMDM257019
Blocks (Seattle)A2A2Y4
Human Protein AtlasENSG00000172159
HPRD07402
IPIIPI00657701   IPI00217088   IPI00642471   IPI00184358   IPI00885145   IPI00552951   
Protein Interaction databases
DIP (DOE-UCLA)A2A2Y4
IntAct (EBI)A2A2Y4
FunCoupENSG00000172159
REACTOMEFRMD3
Protein Interaction Database257019
BioGRIDFRMD3
InParanoidA2A2Y4
Interologous Interaction database A2A2Y4
IntegromeDBFRMD3
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)FRMD3
SNP (GeneSNP Utah)FRMD3
SNP : HGBaseFRMD3
Genetic variants : HAPMAPFRMD3
Somatic Mutations in Cancer : COSMICFRMD3 
CONAN: Copy Number AnalysisFRMD3 
Mutations and Diseases : HGMDFRMD3
OMIM607619   
GENETests607619   
Disease Genetic AssociationFRMD3
Huge Navigator FRMD3 [HugePedia]  FRMD3 [HugeCancerGEM]
Genomic VariantsFRMD3  FRMD3 [DGVbeta]
snp3D : Map Gene to Disease257019
General knowledge
Homologs : HomoloGeneFRMD3
Homology/Alignments : Family Browser (UCSC)FRMD3
Phylogenetic Trees/Animal Genes : TreeFamFRMD3
Chemical/Protein Interactions : CTD257019
Chemical/Pharm GKB GenePA134903920
Clinical trialFRMD3
Cancer Resource (Charite)ENSG00000172159
Ontology : AmiGOcytoplasm  cytoskeleton  cytoskeletal protein binding  integral to membrane  extrinsic to membrane  
Ontology : EGO-EBIcytoplasm  cytoskeleton  cytoskeletal protein binding  integral to membrane  extrinsic to membrane  
Other databases
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
PubGeneFRMD3
iHOPFRMD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:36:21 CEST 2013
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