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FRY (furry homolog (Drosophila))

Identity

Alias_namesC13orf14
chromosome 13 open reading frame 14
furry homolog (Drosophila)
Alias_symbol (synonym)bA37E23.1
13CDNA73
CG003
Other alias214K23.2
bA207N4.2
HGNC (Hugo) FRY
LocusID (NCBI) 10129
Atlas_Id 63606
Location 13q13.1  [Link to chromosome band 13q13]
Location_base_pair Starts at 32605437 and ends at 32870776 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CCDC91 (12p11.22) / FRY (13q13.1)EEF1DP3 (13q13.1) / FRY (13q13.1)FRY (13q13.1) / TMEM127 (2q11.2)
LRRC1 (6p12.1) / FRY (13q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FRY   20367
Cards
Entrez_Gene (NCBI)FRY  10129  furry homolog (Drosophila)
Aliases13CDNA73; 214K23.2; C13orf14; CG003; 
bA207N4.2; bA37E23.1
GeneCards (Weizmann)FRY
Ensembl hg19 (Hinxton)ENSG00000073910 [Gene_View]  chr13:32605437-32870776 [Contig_View]  FRY [Vega]
Ensembl hg38 (Hinxton)ENSG00000073910 [Gene_View]  chr13:32605437-32870776 [Contig_View]  FRY [Vega]
ICGC DataPortalENSG00000073910
TCGA cBioPortalFRY
AceView (NCBI)FRY
Genatlas (Paris)FRY
WikiGenes10129
SOURCE (Princeton)FRY
Genetics Home Reference (NIH)FRY
Genomic and cartography
GoldenPath hg19 (UCSC)FRY  -     chr13:32605437-32870776 +  13q13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FRY  -     13q13.1   [Description]    (hg38-Dec_2013)
EnsemblFRY - 13q13.1 [CytoView hg19]  FRY - 13q13.1 [CytoView hg38]
Mapping of homologs : NCBIFRY [Mapview hg19]  FRY [Mapview hg38]
OMIM614818   
Gene and transcription
Genbank (Entrez)AA993094 AK091422 AK298021 AL049784 BX537670
RefSeq transcript (Entrez)NM_023037
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)FRY
Cluster EST : UnigeneHs.718654 [ NCBI ]
CGAP (NCI)Hs.718654
Alternative Splicing GalleryENSG00000073910
Gene ExpressionFRY [ NCBI-GEO ]   FRY [ EBI - ARRAY_EXPRESS ]   FRY [ SEEK ]   FRY [ MEM ]
Gene Expression Viewer (FireBrowse)FRY [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10129
GTEX Portal (Tissue expression)FRY
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TBA9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TBA9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TBA9
Splice isoforms : SwissVarQ5TBA9
PhosPhoSitePlusQ5TBA9
Domains : Interpro (EBI)ARM-type_fold    Cell_morpho_N    Cell_Morphogen_C    MOR2-PAG1_mid   
Domain families : Pfam (Sanger)MOR2-PAG1_C (PF14225)    MOR2-PAG1_mid (PF14228)    MOR2-PAG1_N (PF14222)   
Domain families : Pfam (NCBI)pfam14225    pfam14228    pfam14222   
Conserved Domain (NCBI)FRY
DMDM Disease mutations10129
Blocks (Seattle)FRY
SuperfamilyQ5TBA9
Human Protein AtlasENSG00000073910
Peptide AtlasQ5TBA9
HPRD10821
IPIIPI01010139   IPI00745047   IPI00552853   IPI00385010   IPI00294542   IPI00746419   IPI00514412   IPI00984417   
Protein Interaction databases
DIP (DOE-UCLA)Q5TBA9
IntAct (EBI)Q5TBA9
FunCoupENSG00000073910
BioGRIDFRY
STRING (EMBL)FRY
ZODIACFRY
Ontologies - Pathways
QuickGOQ5TBA9
Ontology : AmiGOspindle pole  cytoplasm  microtubule organizing center  
Ontology : EGO-EBIspindle pole  cytoplasm  microtubule organizing center  
NDEx NetworkFRY
Atlas of Cancer Signalling NetworkFRY
Wikipedia pathwaysFRY
Orthology - Evolution
OrthoDB10129
GeneTree (enSembl)ENSG00000073910
Phylogenetic Trees/Animal Genes : TreeFamFRY
HOVERGENQ5TBA9
HOGENOMQ5TBA9
Homologs : HomoloGeneFRY
Homology/Alignments : Family Browser (UCSC)FRY
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFRY [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FRY
dbVarFRY
ClinVarFRY
1000_GenomesFRY 
Exome Variant ServerFRY
ExAC (Exome Aggregation Consortium)FRY (select the gene name)
Genetic variants : HAPMAP10129
Genomic Variants (DGV)FRY [DGVbeta]
DECIPHER (Syndromes)13:32605437-32870776  ENSG00000073910
CONAN: Copy Number AnalysisFRY 
Mutations
ICGC Data PortalFRY 
TCGA Data PortalFRY 
Broad Tumor PortalFRY
OASIS PortalFRY [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFRY  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFRY
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FRY
DgiDB (Drug Gene Interaction Database)FRY
DoCM (Curated mutations)FRY (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FRY (select a term)
intoGenFRY
Cancer3DFRY(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614818   
Orphanet
MedgenFRY
Genetic Testing Registry FRY
NextProtQ5TBA9 [Medical]
TSGene10129
GENETestsFRY
Huge Navigator FRY [HugePedia]
snp3D : Map Gene to Disease10129
BioCentury BCIQFRY
ClinGenFRY
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10129
Chemical/Pharm GKB GenePA134927490
Clinical trialFRY
Miscellaneous
canSAR (ICR)FRY (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFRY
EVEXFRY
GoPubMedFRY
iHOPFRY
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:05:29 CET 2017

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