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FSBP (fibrinogen silencer binding protein)

Identity

Other alias-
HGNC (Hugo) FSBP
LocusID (NCBI) 100861412
Atlas_Id 52544
Location 8q22.1  [Link to chromosome band 8q22]
Location_base_pair Starts at 94427712 and ends at 94436952 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FSBP   43653
Cards
Entrez_Gene (NCBI)FSBP  100861412  fibrinogen silencer binding protein
Aliases
GeneCards (Weizmann)FSBP
Ensembl hg19 (Hinxton)ENSG00000265817 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265817 [Gene_View]  chr8:94427712-94436952 [Contig_View]  FSBP [Vega]
ICGC DataPortalENSG00000265817
TCGA cBioPortalFSBP
AceView (NCBI)FSBP
Genatlas (Paris)FSBP
WikiGenes100861412
SOURCE (Princeton)FSBP
Genetics Home Reference (NIH)FSBP
Genomic and cartography
GoldenPath hg38 (UCSC)FSBP  -     chr8:94427712-94436952 -  8q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FSBP  -     8q22.1   [Description]    (hg19-Feb_2009)
EnsemblFSBP - 8q22.1 [CytoView hg19]  FSBP - 8q22.1 [CytoView hg38]
Mapping of homologs : NCBIFSBP [Mapview hg19]  FSBP [Mapview hg38]
OMIM616306   
Gene and transcription
Genbank (Entrez)AF007866 AK074272
RefSeq transcript (Entrez)NM_001256141
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FSBP
Cluster EST : UnigeneHs.30561 [ NCBI ]
CGAP (NCI)Hs.30561
Alternative Splicing GalleryENSG00000265817
Gene ExpressionFSBP [ NCBI-GEO ]   FSBP [ EBI - ARRAY_EXPRESS ]   FSBP [ SEEK ]   FSBP [ MEM ]
Gene Expression Viewer (FireBrowse)FSBP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100861412
GTEX Portal (Tissue expression)FSBP
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95073   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95073  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95073
Splice isoforms : SwissVarO95073
PhosPhoSitePlusO95073
Domains : Interpro (EBI)Myb_DNA-bind_5   
Domain families : Pfam (Sanger)Myb_DNA-bind_5 (PF13873)   
Domain families : Pfam (NCBI)pfam13873   
Conserved Domain (NCBI)FSBP
DMDM Disease mutations100861412
Blocks (Seattle)FSBP
SuperfamilyO95073
Human Protein AtlasENSG00000265817
Peptide AtlasO95073
Protein Interaction databases
DIP (DOE-UCLA)O95073
IntAct (EBI)O95073
FunCoupENSG00000265817
BioGRIDFSBP
STRING (EMBL)FSBP
ZODIACFSBP
Ontologies - Pathways
QuickGOO95073
Ontology : AmiGOprotein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  identical protein binding  
Ontology : EGO-EBIprotein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  identical protein binding  
NDEx NetworkFSBP
Atlas of Cancer Signalling NetworkFSBP
Wikipedia pathwaysFSBP
Orthology - Evolution
OrthoDB100861412
GeneTree (enSembl)ENSG00000265817
Phylogenetic Trees/Animal Genes : TreeFamFSBP
HOVERGENO95073
HOGENOMO95073
Homologs : HomoloGeneFSBP
Homology/Alignments : Family Browser (UCSC)FSBP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFSBP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FSBP
dbVarFSBP
ClinVarFSBP
1000_GenomesFSBP 
Exome Variant ServerFSBP
ExAC (Exome Aggregation Consortium)FSBP (select the gene name)
Genetic variants : HAPMAP100861412
Genomic Variants (DGV)FSBP [DGVbeta]
DECIPHERFSBP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFSBP 
Mutations
ICGC Data PortalFSBP 
TCGA Data PortalFSBP 
Broad Tumor PortalFSBP
OASIS PortalFSBP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFSBP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFSBP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FSBP
DgiDB (Drug Gene Interaction Database)FSBP
DoCM (Curated mutations)FSBP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FSBP (select a term)
intoGenFSBP
Cancer3DFSBP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616306   
Orphanet
MedgenFSBP
Genetic Testing Registry FSBP
NextProtO95073 [Medical]
TSGene100861412
GENETestsFSBP
Target ValidationFSBP
Huge Navigator FSBP [HugePedia]
snp3D : Map Gene to Disease100861412
BioCentury BCIQFSBP
ClinGenFSBP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861412
Chemical/Pharm GKB GenePA166049100
Clinical trialFSBP
Miscellaneous
canSAR (ICR)FSBP (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFSBP
EVEXFSBP
GoPubMedFSBP
iHOPFSBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:09:01 CEST 2017

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