FSD1 (fibronectin type III and SPRY domain containing 1)

Identity

Other names	GLFND
	MGC3213
	MIR1
HGNC	FSD1
Location	19p13.3
Location_base_pair	Starts at 4255691 and ends at 4274838 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	FSD1   13745
Entrez_Gene	FSD1  79187  fibronectin type III and SPRY domain containing 1
	Cards
GeneCards	FSD1
Ensembl	FSD1 [Search_View]   ENSG00000105255 [Gene_View]
Genatlas	FSD1
GeneLynx	FSD1
eGenome	FSD1
euGene	79187
	Genomic and cartography
GoldenPath	FSD1  -  19p13.3   chr19:4255691-4274838 +  19p13.3   [Description]    (hg18-March_2006)
Ensembl	FSD1 - 19p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	FSD1
	Gene and transcription
Genbank	AF316829 [ ENTREZ ]
Genbank	AK021750 [ ENTREZ ]
Genbank	AK315661 [ ENTREZ ]
Genbank	AY032617 [ ENTREZ ]
Genbank	BC003124 [ ENTREZ ]
RefSeq	NM_024333 [ SRS ]    NM_024333 [ ENTREZ ]
RefSeq	AC_000062 [ SRS ]    AC_000062 [ ENTREZ ]
RefSeq	AC_000151 [ SRS ]    AC_000151 [ ENTREZ ]
RefSeq	NC_000019 [ SRS ]    NC_000019 [ ENTREZ ]
RefSeq	NT_011255 [ SRS ]    NT_011255 [ ENTREZ ]
RefSeq	NW_001838477 [ SRS ]    NW_001838477 [ ENTREZ ]
RefSeq	NW_927173 [ SRS ]    NW_927173 [ ENTREZ ]
AceView	FSD1 AceView - NCBI
Unigene	Hs.28144 [ SRS ]    Hs.28144 [ NCBI ]     HS28144 [ spliceNest ]
	Protein : pattern, domain, 3D structure
SwissProt	Q9BTV5 [ SRS]    Q9BTV5 [ EXPASY ]     Q9BTV5 [ INTERPRO ]     Q9BTV5 [ UNIPROT ]
Prosite	PS50188 B302_SPRY [ SRS ]    PS50188 B302_SPRY [ Expasy ]
Prosite	PS51262 COS [ SRS ]    PS51262 COS [ Expasy ]
Prosite	PS50853 FN3 [ SRS ]    PS50853 FN3 [ Expasy ]
Interpro	IPR001870 B302 [ SRS ]    IPR001870 B302 [ EBI ]
Interpro	IPR003649 Bbox_C [ SRS ]    IPR003649 Bbox_C [ EBI ]
Interpro	IPR003879 Butyrophylin [ SRS ]    IPR003879 Butyrophylin [ EBI ]
Interpro	IPR008957 Fibronectin_typ-III-like_fold [ SRS ]    IPR008957 Fibronectin_typ-III-like_fold [ EBI ]
Interpro	IPR003961 FN_III [ SRS ]    IPR003961 FN_III [ EBI ]
Interpro	IPR003877 SPRY_rcpt [ SRS ]    IPR003877 SPRY_rcpt [ EBI ]
CluSTr	Q9BTV5
Pfam	PF00041 fn3 [ SRS ]    PF00041 fn3 [ Sanger ]    pfam00041 [ NCBI-CDD ]
Pfam	PF00622 SPRY [ SRS ]    PF00622 SPRY [ Sanger ]    pfam00622 [ NCBI-CDD ]
Smart	SM00502 BBC [EMBL]
Smart	SM00060 FN3 [EMBL]
Blocks	Q9BTV5
HPRD	17021
	Protein Interaction databases
DIP	Q9BTV5
IntAct	Q9BTV5
	Polymorphism : SNP, mutations, diseases
OMIM	609828    [ map ]
GENECLINICS	609828
SNP	FSD1 [dbSNP-NCBI]
SNP	NM_024333 [SNP-NCI]
SNP	FSD1 [GeneSNPs - Utah]  FSD1] [HGBASE - SRS]
HAPMAP	FSD1 [HAPMAP]
HGMD	FSD1
	General knowledge
Family Browser	FSD1 [UCSC Family Browser]
SOURCE	NM_024333
SMD	Hs.28144
SAGE	Hs.28144
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	centrosome [Amigo]  centrosome
GO	microtubule [Amigo]  microtubule
GO	cell cycle [Amigo]  cell cycle
GO	mitosis [Amigo]  mitosis
GO	cell division [Amigo]  cell division
PubGene	FSD1
TreeFam	FSD1
CTD	79187 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FSD1 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:42:13 2008