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FSHB (follicle stimulating hormone beta subunit)

Identity

Alias_namesbeta chain
Other aliasHH24
HGNC (Hugo) FSHB
LocusID (NCBI) 2488
Atlas_Id 50404
Location 11p14.1  [Link to chromosome band 11p14]
Location_base_pair Starts at 30252563 and ends at 30256824 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FSHB   3964
Cards
Entrez_Gene (NCBI)FSHB  2488  follicle stimulating hormone beta subunit
AliasesHH24
GeneCards (Weizmann)FSHB
Ensembl hg19 (Hinxton)ENSG00000131808 [Gene_View]  chr11:30252563-30256824 [Contig_View]  FSHB [Vega]
Ensembl hg38 (Hinxton)ENSG00000131808 [Gene_View]  chr11:30252563-30256824 [Contig_View]  FSHB [Vega]
ICGC DataPortalENSG00000131808
TCGA cBioPortalFSHB
AceView (NCBI)FSHB
Genatlas (Paris)FSHB
WikiGenes2488
SOURCE (Princeton)FSHB
Genetics Home Reference (NIH)FSHB
Genomic and cartography
GoldenPath hg19 (UCSC)FSHB  -     chr11:30252563-30256824 +  11p14.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FSHB  -     11p14.1   [Description]    (hg38-Dec_2013)
EnsemblFSHB - 11p14.1 [CytoView hg19]  FSHB - 11p14.1 [CytoView hg38]
Mapping of homologs : NCBIFSHB [Mapview hg19]  FSHB [Mapview hg38]
OMIM136530   229070   
Gene and transcription
Genbank (Entrez)BC111848 BC113488 BC113490 BI033915 CD108062
RefSeq transcript (Entrez)NM_000510 NM_001018080
RefSeq genomic (Entrez)NC_000011 NC_018922 NG_008144 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)FSHB
Cluster EST : UnigeneHs.36975 [ NCBI ]
CGAP (NCI)Hs.36975
Alternative Splicing GalleryENSG00000131808
Gene ExpressionFSHB [ NCBI-GEO ]   FSHB [ EBI - ARRAY_EXPRESS ]   FSHB [ SEEK ]   FSHB [ MEM ]
Gene Expression Viewer (FireBrowse)FSHB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2488
GTEX Portal (Tissue expression)FSHB
Protein : pattern, domain, 3D structure
UniProt/SwissProtP01225   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP01225  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP01225
Splice isoforms : SwissVarP01225
PhosPhoSitePlusP01225
Domaine pattern : Prosite (Expaxy)GLYCO_HORMONE_BETA_1 (PS00261)    GLYCO_HORMONE_BETA_2 (PS00689)   
Domains : Interpro (EBI)Cystine-knot_cytokine    Glyco_hormone_CN    Gonadotropin_bsu    Gonadotropin_bsu_CS   
Domain families : Pfam (Sanger)Cys_knot (PF00007)   
Domain families : Pfam (NCBI)pfam00007   
Domain families : Smart (EMBL)GHB (SM00068)  
Conserved Domain (NCBI)FSHB
DMDM Disease mutations2488
Blocks (Seattle)FSHB
PDB (SRS)1FL7    1XWD    4AY9    4MQW   
PDB (PDBSum)1FL7    1XWD    4AY9    4MQW   
PDB (IMB)1FL7    1XWD    4AY9    4MQW   
PDB (RSDB)1FL7    1XWD    4AY9    4MQW   
Structural Biology KnowledgeBase1FL7    1XWD    4AY9    4MQW   
SCOP (Structural Classification of Proteins)1FL7    1XWD    4AY9    4MQW   
CATH (Classification of proteins structures)1FL7    1XWD    4AY9    4MQW   
SuperfamilyP01225
Human Protein AtlasENSG00000131808
Peptide AtlasP01225
HPRD00644
IPIIPI00000853   
Protein Interaction databases
DIP (DOE-UCLA)P01225
IntAct (EBI)P01225
FunCoupENSG00000131808
BioGRIDFSHB
STRING (EMBL)FSHB
ZODIACFSHB
Ontologies - Pathways
QuickGOP01225
Ontology : AmiGOhormone activity  protein binding  extracellular region  extracellular region  cytoplasm  progesterone biosynthetic process  signal transduction  transforming growth factor beta receptor signaling pathway  female gamete generation  female pregnancy  positive regulation of cell proliferation  peptide hormone processing  follicle-stimulating hormone activity  positive regulation of cell migration  follicle-stimulating hormone signaling pathway  regulation of osteoclast differentiation  positive regulation of bone resorption  positive regulation of transcription from RNA polymerase II promoter  Sertoli cell proliferation  extracellular exosome  
Ontology : EGO-EBIhormone activity  protein binding  extracellular region  extracellular region  cytoplasm  progesterone biosynthetic process  signal transduction  transforming growth factor beta receptor signaling pathway  female gamete generation  female pregnancy  positive regulation of cell proliferation  peptide hormone processing  follicle-stimulating hormone activity  positive regulation of cell migration  follicle-stimulating hormone signaling pathway  regulation of osteoclast differentiation  positive regulation of bone resorption  positive regulation of transcription from RNA polymerase II promoter  Sertoli cell proliferation  extracellular exosome  
Pathways : BIOCARTARegulation of Spermatogenesis by CREM [Genes]   
Pathways : KEGGNeuroactive ligand-receptor interaction    GnRH signaling pathway    Ovarian steroidogenesis   
NDEx NetworkFSHB
Atlas of Cancer Signalling NetworkFSHB
Wikipedia pathwaysFSHB
Orthology - Evolution
OrthoDB2488
GeneTree (enSembl)ENSG00000131808
Phylogenetic Trees/Animal Genes : TreeFamFSHB
HOVERGENP01225
HOGENOMP01225
Homologs : HomoloGeneFSHB
Homology/Alignments : Family Browser (UCSC)FSHB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFSHB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FSHB
dbVarFSHB
ClinVarFSHB
1000_GenomesFSHB 
Exome Variant ServerFSHB
ExAC (Exome Aggregation Consortium)FSHB (select the gene name)
Genetic variants : HAPMAP2488
Genomic Variants (DGV)FSHB [DGVbeta]
DECIPHER (Syndromes)11:30252563-30256824  ENSG00000131808
CONAN: Copy Number AnalysisFSHB 
Mutations
ICGC Data PortalFSHB 
TCGA Data PortalFSHB 
Broad Tumor PortalFSHB
OASIS PortalFSHB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFSHB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFSHB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FSHB
DgiDB (Drug Gene Interaction Database)FSHB
DoCM (Curated mutations)FSHB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FSHB (select a term)
intoGenFSHB
Cancer3DFSHB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM136530    229070   
Orphanet10706   
MedgenFSHB
Genetic Testing Registry FSHB
NextProtP01225 [Medical]
TSGene2488
GENETestsFSHB
Huge Navigator FSHB [HugePedia]
snp3D : Map Gene to Disease2488
BioCentury BCIQFSHB
ClinGenFSHB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2488
Chemical/Pharm GKB GenePA28382
Clinical trialFSHB
Miscellaneous
canSAR (ICR)FSHB (select the gene name)
Probes
Litterature
PubMed79 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFSHB
EVEXFSHB
GoPubMedFSHB
iHOPFSHB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 30 15:01:43 CEST 2017

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