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FSTL1 (follistatin like 1)

Identity

Alias_namesfollistatin-like 1
Alias_symbol (synonym)FRP
FSL1
OCC1
OCC-1
tsc36
Other aliasMIR198
HGNC (Hugo) FSTL1
LocusID (NCBI) 11167
Atlas_Id 40644
Location 3q13.33  [Link to chromosome band 3q13]
Location_base_pair Starts at 120113061 and ends at 120169918 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FSTL1 (3q13.33) / ABCB6 (2q35)FSTL1 (3q13.33) / ARL8B (3p26.1)FSTL1 (3q13.33) / FSTL1 (3q13.33)
FSTL1 (3q13.33) / GPCPD1 (20p12.3)FSTL1 (3q13.33) / ZNF143 (11p15.4)GPCPD1 (20p12.3) / FSTL1 (3q13.33)
GSK3B (3q13.33) / FSTL1 (3q13.33)HIRA (22q11.21) / FSTL1 (3q13.33)RAB18 (10p12.1) / FSTL1 (3q13.33)
ZNF410 (14q24.3) / FSTL1 (3q13.33)GSK3B 3q13.33 / FSTL1 3q13.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FSTL1   3972
Cards
Entrez_Gene (NCBI)FSTL1  11167  follistatin like 1
AliasesFRP; FSL1; MIR198
GeneCards (Weizmann)FSTL1
Ensembl hg19 (Hinxton)ENSG00000163430 [Gene_View]  chr3:120113061-120169918 [Contig_View]  FSTL1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000163430 [Gene_View]  chr3:120113061-120169918 [Contig_View]  FSTL1 [Vega]
ICGC DataPortalENSG00000163430
TCGA cBioPortalFSTL1
AceView (NCBI)FSTL1
Genatlas (Paris)FSTL1
WikiGenes11167
SOURCE (Princeton)FSTL1
Genetics Home Reference (NIH)FSTL1
Genomic and cartography
GoldenPath hg19 (UCSC)FSTL1  -     chr3:120113061-120169918 -  3q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)FSTL1  -     3q13.33   [Description]    (hg38-Dec_2013)
EnsemblFSTL1 - 3q13.33 [CytoView hg19]  FSTL1 - 3q13.33 [CytoView hg38]
Mapping of homologs : NCBIFSTL1 [Mapview hg19]  FSTL1 [Mapview hg38]
OMIM605547   
Gene and transcription
Genbank (Entrez)AF288537 AI813946 AK025860 AK289388 AK291138
RefSeq transcript (Entrez)NM_007085
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)FSTL1
Cluster EST : UnigeneHs.269512 [ NCBI ]
CGAP (NCI)Hs.269512
Alternative Splicing GalleryENSG00000163430
Gene ExpressionFSTL1 [ NCBI-GEO ]   FSTL1 [ EBI - ARRAY_EXPRESS ]   FSTL1 [ SEEK ]   FSTL1 [ MEM ]
Gene Expression Viewer (FireBrowse)FSTL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11167
GTEX Portal (Tissue expression)FSTL1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ12841   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ12841  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ12841
Splice isoforms : SwissVarQ12841
PhosPhoSitePlusQ12841
Domaine pattern : Prosite (Expaxy)EF_HAND_2 (PS50222)    KAZAL_2 (PS51465)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF_hand_dom    Fol_N    Follistatin/Osteonectin_EGF    Kazal_dom   
Domain families : Pfam (Sanger)FOLN (PF09289)    Kazal_2 (PF07648)   
Domain families : Pfam (NCBI)pfam09289    pfam07648   
Domain families : Smart (EMBL)EFh (SM00054)  FOLN (SM00274)  KAZAL (SM00280)  
Conserved Domain (NCBI)FSTL1
DMDM Disease mutations11167
Blocks (Seattle)FSTL1
SuperfamilyQ12841
Human Protein AtlasENSG00000163430
Peptide AtlasQ12841
HPRD16120
IPIIPI00029723   IPI00908368   IPI01015631   IPI00944946   IPI00945096   
Protein Interaction databases
DIP (DOE-UCLA)Q12841
IntAct (EBI)Q12841
FunCoupENSG00000163430
BioGRIDFSTL1
STRING (EMBL)FSTL1
ZODIACFSTL1
Ontologies - Pathways
QuickGOQ12841
Ontology : AmiGOcalcium ion binding  protein binding  extracellular region  extracellular space  heparin binding  BMP signaling pathway  response to starvation  extracellular exosome  
Ontology : EGO-EBIcalcium ion binding  protein binding  extracellular region  extracellular space  heparin binding  BMP signaling pathway  response to starvation  extracellular exosome  
NDEx NetworkFSTL1
Atlas of Cancer Signalling NetworkFSTL1
Wikipedia pathwaysFSTL1
Orthology - Evolution
OrthoDB11167
GeneTree (enSembl)ENSG00000163430
Phylogenetic Trees/Animal Genes : TreeFamFSTL1
HOVERGENQ12841
HOGENOMQ12841
Homologs : HomoloGeneFSTL1
Homology/Alignments : Family Browser (UCSC)FSTL1
Gene fusions - Rearrangements
Fusion : MitelmanGSK3B/FSTL1 [3q13.33/3q13.33]  [t(3;3)(q13;q13)]  
Fusion: TCGAGSK3B 3q13.33 FSTL1 3q13.33 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFSTL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FSTL1
dbVarFSTL1
ClinVarFSTL1
1000_GenomesFSTL1 
Exome Variant ServerFSTL1
ExAC (Exome Aggregation Consortium)FSTL1 (select the gene name)
Genetic variants : HAPMAP11167
Genomic Variants (DGV)FSTL1 [DGVbeta]
DECIPHER (Syndromes)3:120113061-120169918  ENSG00000163430
CONAN: Copy Number AnalysisFSTL1 
Mutations
ICGC Data PortalFSTL1 
TCGA Data PortalFSTL1 
Broad Tumor PortalFSTL1
OASIS PortalFSTL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFSTL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFSTL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FSTL1
DgiDB (Drug Gene Interaction Database)FSTL1
DoCM (Curated mutations)FSTL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FSTL1 (select a term)
intoGenFSTL1
Cancer3DFSTL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605547   
Orphanet
MedgenFSTL1
Genetic Testing Registry FSTL1
NextProtQ12841 [Medical]
TSGene11167
GENETestsFSTL1
Huge Navigator FSTL1 [HugePedia]
snp3D : Map Gene to Disease11167
BioCentury BCIQFSTL1
ClinGenFSTL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD11167
Chemical/Pharm GKB GenePA28389
Clinical trialFSTL1
Miscellaneous
canSAR (ICR)FSTL1 (select the gene name)
Probes
Litterature
PubMed40 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFSTL1
EVEXFSTL1
GoPubMedFSTL1
iHOPFSTL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:06:40 CET 2017

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