Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FTCD-AS1 (FTCD antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) FTCD-AS1
HGNC Previous nameFTCD antisense RNA 1 (non-protein coding)
LocusID (NCBI) 100861507
Atlas_Id 79238
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 46151375 and ends at 46152647 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)FTCD-AS1   40243
Cards
Entrez_Gene (NCBI)FTCD-AS1  100861507  FTCD antisense RNA 1
Aliases
GeneCards (Weizmann)FTCD-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr21:46151375-46152647 [Contig_View]  FTCD-AS1 [Vega]
TCGA cBioPortalFTCD-AS1
AceView (NCBI)FTCD-AS1
Genatlas (Paris)FTCD-AS1
WikiGenes100861507
SOURCE (Princeton)FTCD-AS1
Genetics Home Reference (NIH)FTCD-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)FTCD-AS1  -     chr21:46151375-46152647 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FTCD-AS1  -     21q22.3   [Description]    (hg19-Feb_2009)
GoldenPathFTCD-AS1 - 21q22.3 [CytoView hg19]  FTCD-AS1 - 21q22.3 [CytoView hg38]
genome Data Viewer NCBIFTCD-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA905381 AI217733
RefSeq transcript (Entrez)NM_001350598
RefSeq genomic (Entrez)NC_000021 NG_016191 NT_187626
Consensus coding sequences : CCDS (NCBI)FTCD-AS1
Gene ExpressionFTCD-AS1 [ NCBI-GEO ]   FTCD-AS1 [ EBI - ARRAY_EXPRESS ]   FTCD-AS1 [ SEEK ]   FTCD-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)FTCD-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of FTCD-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100861507
GTEX Portal (Tissue expression)FTCD-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FTCD-AS1
DMDM Disease mutations100861507
Blocks (Seattle)FTCD-AS1
Protein Interaction databases
BioGRIDFTCD-AS1
STRING (EMBL)FTCD-AS1
ZODIACFTCD-AS1
Ontologies - Pathways
Huge Navigator FTCD-AS1 [HugePedia]
snp3D : Map Gene to Disease100861507
BioCentury BCIQFTCD-AS1
ClinGenFTCD-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD100861507
Clinical trialFTCD-AS1
Miscellaneous
canSAR (ICR)FTCD-AS1 (select the gene name)
HarmonizomeFTCD-AS1
DataMed IndexFTCD-AS1
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineFTCD-AS1
EVEXFTCD-AS1
GoPubMedFTCD-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Aug 22 19:12:16 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.