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FTHL17 (ferritin heavy chain like 17)

Identity

Alias_namesferritin, heavy polypeptide-like 17
Alias_symbol (synonym)CT38
Other alias
HGNC (Hugo) FTHL17
LocusID (NCBI) 53940
Atlas_Id 63620
Location Xp21.2  [Link to chromosome band Xp21]
Location_base_pair Starts at 31071241 and ends at 31072053 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FTHL17   3987
Cards
Entrez_Gene (NCBI)FTHL17  53940  ferritin heavy chain like 17
AliasesCT38
GeneCards (Weizmann)FTHL17
Ensembl hg19 (Hinxton)ENSG00000132446 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132446 [Gene_View]  chrX:31071241-31072053 [Contig_View]  FTHL17 [Vega]
ICGC DataPortalENSG00000132446
TCGA cBioPortalFTHL17
AceView (NCBI)FTHL17
Genatlas (Paris)FTHL17
WikiGenes53940
SOURCE (Princeton)FTHL17
Genetics Home Reference (NIH)FTHL17
Genomic and cartography
GoldenPath hg38 (UCSC)FTHL17  -     chrX:31071241-31072053 -  Xp21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FTHL17  -     Xp21.2   [Description]    (hg19-Feb_2009)
EnsemblFTHL17 - Xp21.2 [CytoView hg19]  FTHL17 - Xp21.2 [CytoView hg38]
Mapping of homologs : NCBIFTHL17 [Mapview hg19]  FTHL17 [Mapview hg38]
OMIM300308   
Gene and transcription
Genbank (Entrez)AF285592 BC069069 BC069538 BC100768 BC100769
RefSeq transcript (Entrez)NM_031894
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FTHL17
Cluster EST : UnigeneHs.333125 [ NCBI ]
CGAP (NCI)Hs.333125
Alternative Splicing GalleryENSG00000132446
Gene ExpressionFTHL17 [ NCBI-GEO ]   FTHL17 [ EBI - ARRAY_EXPRESS ]   FTHL17 [ SEEK ]   FTHL17 [ MEM ]
Gene Expression Viewer (FireBrowse)FTHL17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)53940
GTEX Portal (Tissue expression)FTHL17
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXU8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXU8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXU8
Splice isoforms : SwissVarQ9BXU8
PhosPhoSitePlusQ9BXU8
Domaine pattern : Prosite (Expaxy)FERRITIN_2 (PS00204)    FERRITIN_LIKE (PS50905)   
Domains : Interpro (EBI)Ferritin    Ferritin-like_diiron    Ferritin-like_SF    Ferritin-rel    Ferritin_CS    Ferritin_DPS_dom   
Domain families : Pfam (Sanger)Ferritin (PF00210)   
Domain families : Pfam (NCBI)pfam00210   
Conserved Domain (NCBI)FTHL17
DMDM Disease mutations53940
Blocks (Seattle)FTHL17
SuperfamilyQ9BXU8
Human Protein AtlasENSG00000132446
Peptide AtlasQ9BXU8
HPRD02254
IPIIPI00011070   
Protein Interaction databases
DIP (DOE-UCLA)Q9BXU8
IntAct (EBI)Q9BXU8
FunCoupENSG00000132446
BioGRIDFTHL17
STRING (EMBL)FTHL17
ZODIACFTHL17
Ontologies - Pathways
QuickGOQ9BXU8
Ontology : AmiGOiron ion binding  mitochondrion  iron ion transport  intracellular sequestering of iron ion  ferric iron binding  
Ontology : EGO-EBIiron ion binding  mitochondrion  iron ion transport  intracellular sequestering of iron ion  ferric iron binding  
NDEx NetworkFTHL17
Atlas of Cancer Signalling NetworkFTHL17
Wikipedia pathwaysFTHL17
Orthology - Evolution
OrthoDB53940
GeneTree (enSembl)ENSG00000132446
Phylogenetic Trees/Animal Genes : TreeFamFTHL17
HOVERGENQ9BXU8
HOGENOMQ9BXU8
Homologs : HomoloGeneFTHL17
Homology/Alignments : Family Browser (UCSC)FTHL17
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFTHL17 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FTHL17
dbVarFTHL17
ClinVarFTHL17
1000_GenomesFTHL17 
Exome Variant ServerFTHL17
ExAC (Exome Aggregation Consortium)FTHL17 (select the gene name)
Genetic variants : HAPMAP53940
Genomic Variants (DGV)FTHL17 [DGVbeta]
DECIPHERFTHL17 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFTHL17 
Mutations
ICGC Data PortalFTHL17 
TCGA Data PortalFTHL17 
Broad Tumor PortalFTHL17
OASIS PortalFTHL17 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFTHL17  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFTHL17
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch FTHL17
DgiDB (Drug Gene Interaction Database)FTHL17
DoCM (Curated mutations)FTHL17 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FTHL17 (select a term)
intoGenFTHL17
Cancer3DFTHL17(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300308   
Orphanet
MedgenFTHL17
Genetic Testing Registry FTHL17
NextProtQ9BXU8 [Medical]
TSGene53940
GENETestsFTHL17
Target ValidationFTHL17
Huge Navigator FTHL17 [HugePedia]
snp3D : Map Gene to Disease53940
BioCentury BCIQFTHL17
ClinGenFTHL17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD53940
Chemical/Pharm GKB GenePA28402
Clinical trialFTHL17
Miscellaneous
canSAR (ICR)FTHL17 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFTHL17
EVEXFTHL17
GoPubMedFTHL17
iHOPFTHL17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:00 CEST 2017

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