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FTL (ferritin, light polypeptide)

Identity

Other namesNBIA3
HGNC (Hugo) FTL
LocusID (NCBI) 2512
Location 19q13.33
Location_base_pair Starts at 49468566 and ends at 49470136 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)FTL   3999
Entrez_Gene (NCBI)FTL  2512  ferritin, light polypeptide
Cards
GeneCards (Weizmann)FTL
Ensembl (Hinxton)ENSG00000087086 [Gene_View]  chr19:49468566-49470136 [Contig_View]  FTL [Vega]
AceView (NCBI)FTL
Genatlas (Paris)FTL
SOURCE (Stanford)NM_000146
Genomic and cartography
GoldenPath (UCSC)FTL  -  19q13.33   chr19:49468566-49470136 +  19q13.33   [Description]    (hg19-Feb_2009)
EnsemblFTL - 19q13.33 [CytoView]
Mapping of homologs : NCBIFTL [Mapview]
OMIM134790   600886   606159   
Gene and transcription
Genbank (Entrez)AF147331 AK026534 AK130191 AK130205 AK131048
RefSeq transcript (SRS)NM_000146
RefSeq transcript (Entrez)NM_000146
RefSeq genomic (SRS)AC_000151 NC_000019 NC_018930 NG_008152 NT_011109 NW_001838497 NW_004078099
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NG_008152 NT_011109 NW_001838497 NW_004078099
Consensus coding sequences : CCDS (NCBI)FTL
Cluster EST : UnigeneHs.433670 [ SRS ] Hs.433670 [ NCBI ]
CGAP (NCI)Hs.433670
Alternative Splicing : Fast-db (Paris)GSHG0015084
Alternative Splicing GalleryENSG00000087086
Gene ExpressionFTL [ NCBI-GEO ]   FTL [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP02792 (SRS) P02792 (Uniprot)
NextProtP02792
With graphics : InterProP02792
Splice isoforms : SwissVarP02792(Swissvar)
Domaine pattern : Prosite (SRS)FERRITIN_1 (PS00540)    FERRITIN_2 (PS00204)    FERRITIN_LIKE (PS50905)   
Domaine pattern : Prosite (Expaxy)FERRITIN_1 (PS00540)    FERRITIN_2 (PS00204)    FERRITIN_LIKE (PS50905)   
Domains : Interpro (SRS)Ferritin    Ferritin-like_diiron    Ferritin-rel    Ferritin/RNR-like    Ferritin_CS    Ferritin_DPS_dom   
Domains : Interpro (EBI)Ferritin    Ferritin-like_diiron    Ferritin-rel    Ferritin/RNR-like    Ferritin_CS    Ferritin_DPS_dom   
Related proteins : CluSTrP02792
Domain families : Pfam (SRS)Ferritin (PF00210)   
Domain families : Pfam (Sanger)Ferritin (PF00210)   
Domain families : Pfam (NCBI)pfam00210   
DMDM2512
Blocks (Seattle)P02792
PDB (SRS)2FFX    2FG4    2FG8    3HX2    3HX5    3HX7    3KXU   
PDB (PDBSum)2FFX    2FG4    2FG8    3HX2    3HX5    3HX7    3KXU   
PDB (IMB)2FFX    2FG4    2FG8    3HX2    3HX5    3HX7    3KXU   
PDB (RSDB)2FFX    2FG4    2FG8    3HX2    3HX5    3HX7    3KXU   
Human Protein AtlasENSG00000087086
HPRD00616
IPIIPI01014563   IPI00375676   IPI00383310   
Protein Interaction databases
DIP (DOE-UCLA)P02792
IntAct (EBI)P02792
FunCoupENSG00000087086
REACTOMEFTL
Protein Interaction Database2512
BioGRIDFTL
InParanoidP02792
Interologous Interaction database P02792
IntegromeDBFTL
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)FTL
SNP (GeneSNP Utah)FTL
SNP : HGBaseFTL
Genetic variants : HAPMAPFTL
Somatic Mutations in Cancer : COSMICFTL 
CONAN: Copy Number AnalysisFTL 
Mutations and Diseases : HGMDFTL
OMIM134790    600886    606159   
GENETests134790    600886    606159   
Disease Genetic AssociationFTL
Huge Navigator FTL [HugePedia]  FTL [HugeCancerGEM]
Genomic VariantsFTL  FTL [DGVbeta]
snp3D : Map Gene to Disease2512
General knowledge
Homologs : HomoloGeneFTL
Homology/Alignments : Family Browser (UCSC)FTL
Phylogenetic Trees/Animal Genes : TreeFamFTL
Chemical/Protein Interactions : CTD2512
Chemical/Pharm GKB GenePA28412
Clinical trialFTL
Cancer Resource (Charite)ENSG00000087086
Ontology : AmiGOiron ion binding  cytosol  iron ion transport  cellular iron ion homeostasis  post-Golgi vesicle-mediated transport  intracellular ferritin complex  ferric iron binding  cell death  cellular membrane organization  oxidoreductase activity  identical protein binding  iron ion homeostasis  transmembrane transport  
Ontology : EGO-EBIiron ion binding  cytosol  iron ion transport  cellular iron ion homeostasis  post-Golgi vesicle-mediated transport  intracellular ferritin complex  ferric iron binding  cell death  cellular membrane organization  oxidoreductase activity  identical protein binding  iron ion homeostasis  transmembrane transport  
Other databases
Probes
Litterature
PubMed113 Pubmed reference(s) in Entrez
PubGeneFTL
iHOPFTL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:20:56 CEST 2013
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