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FTMT (ferritin mitochondrial)

Identity

Alias_symbol (synonym)MtF
Other aliasMTF
HGNC (Hugo) FTMT
LocusID (NCBI) 94033
Atlas_Id 52500
Location 5q23.1  [Link to chromosome band 5q23]
Location_base_pair Starts at 121851955 and ends at 121852828 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FTMT   17345
Cards
Entrez_Gene (NCBI)FTMT  94033  ferritin mitochondrial
AliasesMTF
GeneCards (Weizmann)FTMT
Ensembl hg19 (Hinxton)ENSG00000181867 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181867 [Gene_View]  chr5:121851955-121852828 [Contig_View]  FTMT [Vega]
ICGC DataPortalENSG00000181867
TCGA cBioPortalFTMT
AceView (NCBI)FTMT
Genatlas (Paris)FTMT
WikiGenes94033
SOURCE (Princeton)FTMT
Genetics Home Reference (NIH)FTMT
Genomic and cartography
GoldenPath hg38 (UCSC)FTMT  -     chr5:121851955-121852828 +  5q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FTMT  -     5q23.1   [Description]    (hg19-Feb_2009)
EnsemblFTMT - 5q23.1 [CytoView hg19]  FTMT - 5q23.1 [CytoView hg38]
Mapping of homologs : NCBIFTMT [Mapview hg19]  FTMT [Mapview hg38]
OMIM608847   
Gene and transcription
Genbank (Entrez)BC034419 HQ258558
RefSeq transcript (Entrez)NM_177478
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FTMT
Cluster EST : UnigeneHs.105324 [ NCBI ]
CGAP (NCI)Hs.105324
Alternative Splicing GalleryENSG00000181867
Gene ExpressionFTMT [ NCBI-GEO ]   FTMT [ EBI - ARRAY_EXPRESS ]   FTMT [ SEEK ]   FTMT [ MEM ]
Gene Expression Viewer (FireBrowse)FTMT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)94033
GTEX Portal (Tissue expression)FTMT
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N4E7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N4E7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N4E7
Splice isoforms : SwissVarQ8N4E7
Catalytic activity : Enzyme1.16.3.1 [ Enzyme-Expasy ]   1.16.3.11.16.3.1 [ IntEnz-EBI ]   1.16.3.1 [ BRENDA ]   1.16.3.1 [ KEGG ]   
PhosPhoSitePlusQ8N4E7
Domaine pattern : Prosite (Expaxy)FERRITIN_2 (PS00204)    FERRITIN_LIKE (PS50905)   
Domains : Interpro (EBI)Ferritin    Ferritin-like_diiron    Ferritin-like_SF    Ferritin-rel    Ferritin_CS    Ferritin_DPS_dom   
Domain families : Pfam (Sanger)Ferritin (PF00210)   
Domain families : Pfam (NCBI)pfam00210   
Conserved Domain (NCBI)FTMT
DMDM Disease mutations94033
Blocks (Seattle)FTMT
PDB (SRS)1R03   
PDB (PDBSum)1R03   
PDB (IMB)1R03   
PDB (RSDB)1R03   
Structural Biology KnowledgeBase1R03   
SCOP (Structural Classification of Proteins)1R03   
CATH (Classification of proteins structures)1R03   
SuperfamilyQ8N4E7
Human Protein AtlasENSG00000181867
Peptide AtlasQ8N4E7
HPRD12316
IPIIPI00166689   
Protein Interaction databases
DIP (DOE-UCLA)Q8N4E7
IntAct (EBI)Q8N4E7
FunCoupENSG00000181867
BioGRIDFTMT
STRING (EMBL)FTMT
ZODIACFTMT
Ontologies - Pathways
QuickGOQ8N4E7
Ontology : AmiGOferroxidase activity  iron ion binding  nucleus  mitochondrion  iron ion transport  cellular iron ion homeostasis  intracellular sequestering of iron ion  ferric iron binding  positive regulation of cell proliferation  positive regulation of lyase activity  oxidation-reduction process  positive regulation of succinate dehydrogenase activity  positive regulation of aconitate hydratase activity  
Ontology : EGO-EBIferroxidase activity  iron ion binding  nucleus  mitochondrion  iron ion transport  cellular iron ion homeostasis  intracellular sequestering of iron ion  ferric iron binding  positive regulation of cell proliferation  positive regulation of lyase activity  oxidation-reduction process  positive regulation of succinate dehydrogenase activity  positive regulation of aconitate hydratase activity  
Pathways : KEGGPorphyrin and chlorophyll metabolism    Mineral absorption   
NDEx NetworkFTMT
Atlas of Cancer Signalling NetworkFTMT
Wikipedia pathwaysFTMT
Orthology - Evolution
OrthoDB94033
GeneTree (enSembl)ENSG00000181867
Phylogenetic Trees/Animal Genes : TreeFamFTMT
HOVERGENQ8N4E7
HOGENOMQ8N4E7
Homologs : HomoloGeneFTMT
Homology/Alignments : Family Browser (UCSC)FTMT
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFTMT [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FTMT
dbVarFTMT
ClinVarFTMT
1000_GenomesFTMT 
Exome Variant ServerFTMT
ExAC (Exome Aggregation Consortium)FTMT (select the gene name)
Genetic variants : HAPMAP94033
Genomic Variants (DGV)FTMT [DGVbeta]
DECIPHERFTMT [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFTMT 
Mutations
ICGC Data PortalFTMT 
TCGA Data PortalFTMT 
Broad Tumor PortalFTMT
OASIS PortalFTMT [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFTMT  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFTMT
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch FTMT
DgiDB (Drug Gene Interaction Database)FTMT
DoCM (Curated mutations)FTMT (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FTMT (select a term)
intoGenFTMT
Cancer3DFTMT(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608847   
Orphanet
MedgenFTMT
Genetic Testing Registry FTMT
NextProtQ8N4E7 [Medical]
TSGene94033
GENETestsFTMT
Target ValidationFTMT
Huge Navigator FTMT [HugePedia]
snp3D : Map Gene to Disease94033
BioCentury BCIQFTMT
ClinGenFTMT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94033
Chemical/Pharm GKB GenePA134941146
Clinical trialFTMT
Miscellaneous
canSAR (ICR)FTMT (select the gene name)
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFTMT
EVEXFTMT
GoPubMedFTMT
iHOPFTMT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:53:48 CEST 2017

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