Atlas of Genetics and Cytogenetics in Oncology and Haematology


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X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

FTX (FTX transcript, XIST regulator (non-protein coding))

Identity

Other aliasLINC00182
MIR374AHG
NCRNA00182
HGNC (Hugo) FTX
LocusID (NCBI) 100302692
Atlas_Id 57137
Location Xq13.2  [Link to chromosome band Xq13]
Location_base_pair Starts at 74278374 and ends at 74292600 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ASXL1 (20q11.21) / FTX (Xq13.2)CADM2 (3p12.1) / FTX (Xq13.2)DNAJB6 (7q36.3) / FTX (Xq13.2)
FTX (Xq13.2) / ARL17A (17q21.31)FTX (Xq13.2) / FTX (Xq13.2)FTX (Xq13.2) / PITPNA (17p13.3)
TKFC (11q12.2) / FTX (Xq13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FTX   37190
Cards
Entrez_Gene (NCBI)FTX  100302692  FTX transcript, XIST regulator (non-protein coding)
AliasesLINC00182; MIR374AHG; NCRNA00182
GeneCards (Weizmann)FTX
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:74278374-74292600 [Contig_View]  FTX [Vega]
TCGA cBioPortalFTX
AceView (NCBI)FTX
Genatlas (Paris)FTX
WikiGenes100302692
SOURCE (Princeton)FTX
Genetics Home Reference (NIH)FTX
Genomic and cartography
GoldenPath hg38 (UCSC)FTX  -     chrX:74278374-74292600 -  Xq13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FTX  -     Xq13.2   [Description]    (hg19-Feb_2009)
EnsemblFTX - Xq13.2 [CytoView hg19]  FTX - Xq13.2 [CytoView hg38]
Mapping of homologs : NCBIFTX [Mapview hg19]  FTX [Mapview hg38]
OMIM300936   
Gene and transcription
Genbank (Entrez)AK057701 AK311345 BC016373
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FTX
Cluster EST : UnigeneHs.349570 [ NCBI ]
CGAP (NCI)Hs.349570
Gene ExpressionFTX [ NCBI-GEO ]   FTX [ EBI - ARRAY_EXPRESS ]   FTX [ SEEK ]   FTX [ MEM ]
Gene Expression Viewer (FireBrowse)FTX [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302692
GTEX Portal (Tissue expression)FTX
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)FTX
DMDM Disease mutations100302692
Blocks (Seattle)FTX
Protein Interaction databases
BioGRIDFTX
STRING (EMBL)FTX
ZODIACFTX
Ontologies - Pathways
Huge Navigator FTX [HugePedia]
snp3D : Map Gene to Disease100302692
BioCentury BCIQFTX
ClinGenFTX
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302692
Chemical/Pharm GKB GenePA165757156
Clinical trialFTX
Miscellaneous
canSAR (ICR)FTX (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFTX
EVEXFTX
GoPubMedFTX
iHOPFTX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:13:52 CET 2017

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