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FUNDC2 (FUN14 domain containing 2)

Identity

Alias (NCBI)DC44
HCBP6
HCC3
PD03104
HGNC (Hugo) FUNDC2
HGNC Alias symbHCBP6
DC44
LocusID (NCBI) 65991
Atlas_Id 53002
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 155026844 and ends at 155060304 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BRCC3 (Xq28) / FUNDC2 (Xq28)DEPDC1B (5q12.1) / FUNDC2 (Xq28)MIR548N (2q31.2) / FUNDC2 (Xq28)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)FUNDC2   24925
Cards
Entrez_Gene (NCBI)FUNDC2    FUN14 domain containing 2
AliasesDC44; HCBP6; HCC3; PD03104
GeneCards (Weizmann)FUNDC2
Ensembl hg19 (Hinxton)ENSG00000165775 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165775 [Gene_View]  ENSG00000165775 [Sequence]  chrX:155026844-155060304 [Contig_View]  FUNDC2 [Vega]
ICGC DataPortalENSG00000165775
TCGA cBioPortalFUNDC2
AceView (NCBI)FUNDC2
Genatlas (Paris)FUNDC2
SOURCE (Princeton)FUNDC2
Genetics Home Reference (NIH)FUNDC2
Genomic and cartography
GoldenPath hg38 (UCSC)FUNDC2  -     chrX:155026844-155060304 +  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FUNDC2  -     Xq28   [Description]    (hg19-Feb_2009)
GoldenPathFUNDC2 - Xq28 [CytoView hg19]  FUNDC2 - Xq28 [CytoView hg38]
ImmunoBaseENSG00000165775
Genome Data Viewer NCBIFUNDC2 [Mapview hg19]  
OMIM301042   
Gene and transcription
Genbank (Entrez)AF267862 AF320778 AI886036 AJ272054 AK091092
RefSeq transcript (Entrez)NM_023934
Consensus coding sequences : CCDS (NCBI)FUNDC2
Gene ExpressionFUNDC2 [ NCBI-GEO ]   FUNDC2 [ EBI - ARRAY_EXPRESS ]   FUNDC2 [ SEEK ]   FUNDC2 [ MEM ]
Gene Expression Viewer (FireBrowse)FUNDC2 [ Firebrowse - Broad ]
GenevisibleExpression of FUNDC2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)65991
GTEX Portal (Tissue expression)FUNDC2
Human Protein AtlasENSG00000165775-FUNDC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BWH2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BWH2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BWH2
PhosPhoSitePlusQ9BWH2
Domains : Interpro (EBI)FUN14   
Domain families : Pfam (Sanger)FUN14 (PF04930)   
Domain families : Pfam (NCBI)pfam04930   
Conserved Domain (NCBI)FUNDC2
SuperfamilyQ9BWH2
AlphaFold pdb e-kbQ9BWH2   
Human Protein Atlas [tissue]ENSG00000165775-FUNDC2 [tissue]
HPRD06586
Protein Interaction databases
DIP (DOE-UCLA)Q9BWH2
IntAct (EBI)Q9BWH2
BioGRIDFUNDC2
STRING (EMBL)FUNDC2
ZODIACFUNDC2
Ontologies - Pathways
QuickGOQ9BWH2
Ontology : AmiGOautophagy of mitochondrion  protein binding  nucleus  mitochondrion  mitochondrion  integral component of mitochondrial outer membrane  
Ontology : EGO-EBIautophagy of mitochondrion  protein binding  nucleus  mitochondrion  mitochondrion  integral component of mitochondrial outer membrane  
NDEx NetworkFUNDC2
Atlas of Cancer Signalling NetworkFUNDC2
Wikipedia pathwaysFUNDC2
Orthology - Evolution
OrthoDB65991
GeneTree (enSembl)ENSG00000165775
Phylogenetic Trees/Animal Genes : TreeFamFUNDC2
Homologs : HomoloGeneFUNDC2
Homology/Alignments : Family Browser (UCSC)FUNDC2
Gene fusions - Rearrangements
Fusion : QuiverFUNDC2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFUNDC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FUNDC2
dbVarFUNDC2
ClinVarFUNDC2
MonarchFUNDC2
1000_GenomesFUNDC2 
Exome Variant ServerFUNDC2
GNOMAD BrowserENSG00000165775
Varsome BrowserFUNDC2
ACMGFUNDC2 variants
VarityQ9BWH2
Genomic Variants (DGV)FUNDC2 [DGVbeta]
DECIPHERFUNDC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFUNDC2 
Mutations
ICGC Data PortalFUNDC2 
TCGA Data PortalFUNDC2 
Broad Tumor PortalFUNDC2
OASIS PortalFUNDC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFUNDC2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFUNDC2
Mutations and Diseases : HGMDFUNDC2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFUNDC2
DgiDB (Drug Gene Interaction Database)FUNDC2
DoCM (Curated mutations)FUNDC2
CIViC (Clinical Interpretations of Variants in Cancer)FUNDC2
Cancer3DFUNDC2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM301042   
Orphanet
DisGeNETFUNDC2
MedgenFUNDC2
Genetic Testing Registry FUNDC2
NextProtQ9BWH2 [Medical]
GENETestsFUNDC2
Target ValidationFUNDC2
Huge Navigator FUNDC2 [HugePedia]
ClinGenFUNDC2
Clinical trials, drugs, therapy
MyCancerGenomeFUNDC2
Protein Interactions : CTDFUNDC2
Pharm GKB GenePA134908797
PharosQ9BWH2
Clinical trialFUNDC2
Miscellaneous
canSAR (ICR)FUNDC2
HarmonizomeFUNDC2
DataMed IndexFUNDC2
Probes
Litterature
PubMed32 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFUNDC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:10:03 CEST 2021

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