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FUOM (fucose mutarotase)

Identity

Alias_namesC10orf125
chromosome 10 open reading frame 125
Alias_symbol (synonym)FLJ26016
FucU
FucM
Other aliasFUCU
HGNC (Hugo) FUOM
LocusID (NCBI) 282969
Atlas_Id 63628
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 133355154 and ends at 133358025 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
FUOM (10q26.3) / DOCK1 (10q26.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FUOM   24733
Cards
Entrez_Gene (NCBI)FUOM  282969  fucose mutarotase
AliasesC10orf125; FUCU; FucM
GeneCards (Weizmann)FUOM
Ensembl hg19 (Hinxton)ENSG00000148803 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148803 [Gene_View]  chr10:133355154-133358025 [Contig_View]  FUOM [Vega]
ICGC DataPortalENSG00000148803
TCGA cBioPortalFUOM
AceView (NCBI)FUOM
Genatlas (Paris)FUOM
WikiGenes282969
SOURCE (Princeton)FUOM
Genetics Home Reference (NIH)FUOM
Genomic and cartography
GoldenPath hg38 (UCSC)FUOM  -     chr10:133355154-133358025 -  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FUOM  -     10q26.3   [Description]    (hg19-Feb_2009)
EnsemblFUOM - 10q26.3 [CytoView hg19]  FUOM - 10q26.3 [CytoView hg38]
Mapping of homologs : NCBIFUOM [Mapview hg19]  FUOM [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI333356 AK129527 AK310070 BC129818 BC129819
RefSeq transcript (Entrez)NM_001098483 NM_001301827 NM_001301828 NM_198472
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FUOM
Cluster EST : UnigeneHs.155823 [ NCBI ]
CGAP (NCI)Hs.155823
Alternative Splicing GalleryENSG00000148803
Gene ExpressionFUOM [ NCBI-GEO ]   FUOM [ EBI - ARRAY_EXPRESS ]   FUOM [ SEEK ]   FUOM [ MEM ]
Gene Expression Viewer (FireBrowse)FUOM [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)282969
GTEX Portal (Tissue expression)FUOM
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2VDF0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2VDF0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2VDF0
Splice isoforms : SwissVarA2VDF0
PhosPhoSitePlusA2VDF0
Domains : Interpro (EBI)RbsD-like    RbsD_FucU   
Domain families : Pfam (Sanger)RbsD_FucU (PF05025)   
Domain families : Pfam (NCBI)pfam05025   
Conserved Domain (NCBI)FUOM
DMDM Disease mutations282969
Blocks (Seattle)FUOM
SuperfamilyA2VDF0
Human Protein AtlasENSG00000148803
Peptide AtlasA2VDF0
HPRD12564
IPIIPI00815895   IPI00845372   IPI00479230   
Protein Interaction databases
DIP (DOE-UCLA)A2VDF0
IntAct (EBI)A2VDF0
FunCoupENSG00000148803
BioGRIDFUOM
STRING (EMBL)FUOM
ZODIACFUOM
Ontologies - Pathways
QuickGOA2VDF0
Ontology : AmiGOcytosol  fucose metabolic process  racemase and epimerase activity, acting on carbohydrates and derivatives  racemase and epimerase activity, acting on carbohydrates and derivatives  fucosylation  fucose binding  negative regulation of neuron differentiation  female mating behavior  
Ontology : EGO-EBIcytosol  fucose metabolic process  racemase and epimerase activity, acting on carbohydrates and derivatives  racemase and epimerase activity, acting on carbohydrates and derivatives  fucosylation  fucose binding  negative regulation of neuron differentiation  female mating behavior  
NDEx NetworkFUOM
Atlas of Cancer Signalling NetworkFUOM
Wikipedia pathwaysFUOM
Orthology - Evolution
OrthoDB282969
GeneTree (enSembl)ENSG00000148803
Phylogenetic Trees/Animal Genes : TreeFamFUOM
HOVERGENA2VDF0
HOGENOMA2VDF0
Homologs : HomoloGeneFUOM
Homology/Alignments : Family Browser (UCSC)FUOM
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFUOM [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FUOM
dbVarFUOM
ClinVarFUOM
1000_GenomesFUOM 
Exome Variant ServerFUOM
ExAC (Exome Aggregation Consortium)FUOM (select the gene name)
Genetic variants : HAPMAP282969
Genomic Variants (DGV)FUOM [DGVbeta]
DECIPHERFUOM [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFUOM 
Mutations
ICGC Data PortalFUOM 
TCGA Data PortalFUOM 
Broad Tumor PortalFUOM
OASIS PortalFUOM [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDFUOM
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FUOM
DgiDB (Drug Gene Interaction Database)FUOM
DoCM (Curated mutations)FUOM (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FUOM (select a term)
intoGenFUOM
Cancer3DFUOM(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenFUOM
Genetic Testing Registry FUOM
NextProtA2VDF0 [Medical]
TSGene282969
GENETestsFUOM
Target ValidationFUOM
Huge Navigator FUOM [HugePedia]
snp3D : Map Gene to Disease282969
BioCentury BCIQFUOM
ClinGenFUOM
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD282969
Chemical/Pharm GKB GenePA134972390
Clinical trialFUOM
Miscellaneous
canSAR (ICR)FUOM (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFUOM
EVEXFUOM
GoPubMedFUOM
iHOPFUOM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:09:01 CEST 2017

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