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FUT10 (fucosyltransferase 10)

Identity

Alias (NCBI)FUCTX
HGNC (Hugo) FUT10
HGNC Alias namealpha (1,3) fucosyltransferase
HGNC Previous namefucosyltransferase 10 (alpha (1,3) fucosyltransferase)
LocusID (NCBI) 84750
Atlas_Id 63629
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 33370826 and ends at 33473146 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANK1 (8p11.21)::FUT10 (8p12)DNAH12 (3p14.3)::FUT10 (8p12)FUT10 (8p12)::GAB2 (11q14.1)
FUT10 (8p12)::TDRP (8p23.3)LIPA (10q23.31)::FUT10 (8p12)FUT10 GAB2
FUT10 C8orf42

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

 

Nomenclature
HGNC (Hugo)FUT10   19234
Cards
Entrez_Gene (NCBI)FUT10    fucosyltransferase 10
AliasesFUCTX
GeneCards (Weizmann)FUT10
Ensembl hg19 (Hinxton)ENSG00000172728 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172728 [Gene_View]  ENSG00000172728 [Sequence]  chr8:33370826-33473146 [Contig_View]  FUT10 [Vega]
ICGC DataPortalENSG00000172728
TCGA cBioPortalFUT10
AceView (NCBI)FUT10
Genatlas (Paris)FUT10
SOURCE (Princeton)FUT10
Genetics Home Reference (NIH)FUT10
Genomic and cartography
GoldenPath hg38 (UCSC)FUT10  -     chr8:33370826-33473146 -  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FUT10  -     8p12   [Description]    (hg19-Feb_2009)
GoldenPathFUT10 - 8p12 [CytoView hg19]  FUT10 - 8p12 [CytoView hg38]
ImmunoBaseENSG00000172728
Genome Data Viewer NCBIFUT10 [Mapview hg19]  
OMIM616931   
Gene and transcription
Genbank (Entrez)AJ431184 AJ512465 AJ535838 AJ535839 AJ582015
RefSeq transcript (Entrez)NM_032664
Consensus coding sequences : CCDS (NCBI)FUT10
Gene ExpressionFUT10 [ NCBI-GEO ]   FUT10 [ EBI - ARRAY_EXPRESS ]   FUT10 [ SEEK ]   FUT10 [ MEM ]
Gene Expression Viewer (FireBrowse)FUT10 [ Firebrowse - Broad ]
GenevisibleExpression of FUT10 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84750
GTEX Portal (Tissue expression)FUT10
Human Protein AtlasENSG00000172728-FUT10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P4F1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P4F1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P4F1
Catalytic activity : Enzyme2.4.1.- [ Enzyme-Expasy ]   2.4.1.-2.4.1.- [ IntEnz-EBI ]   2.4.1.- [ BRENDA ]   2.4.1.- [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ6P4F1
Domains : Interpro (EBI)Alpha-1_3-FUT_met    Glyco_tran_10_N    Glyco_trans_10    GT10-like_sf   
Domain families : Pfam (Sanger)Glyco_tran_10_N (PF17039)    Glyco_transf_10 (PF00852)   
Domain families : Pfam (NCBI)pfam17039    pfam00852   
Conserved Domain (NCBI)FUT10
SuperfamilyQ6P4F1
AlphaFold pdb e-kbQ6P4F1   
Human Protein Atlas [tissue]ENSG00000172728-FUT10 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q6P4F1
IntAct (EBI)Q6P4F1
BioGRIDFUT10
STRING (EMBL)FUT10
ZODIACFUT10
Ontologies - Pathways
QuickGOQ6P4F1
Ontology : AmiGOnucleoplasm  endoplasmic reticulum  Golgi apparatus  Golgi apparatus  protein folding  protein glycosylation  protein glycosylation  protein targeting  nervous system development  fertilization  integral component of membrane  hemopoiesis  Golgi cisterna membrane  fucosylation  wound healing  L-fucose catabolic process  alpha-(1->3)-fucosyltransferase activity  alpha-(1->3)-fucosyltransferase activity  
Ontology : EGO-EBInucleoplasm  endoplasmic reticulum  Golgi apparatus  Golgi apparatus  protein folding  protein glycosylation  protein glycosylation  protein targeting  nervous system development  fertilization  integral component of membrane  hemopoiesis  Golgi cisterna membrane  fucosylation  wound healing  L-fucose catabolic process  alpha-(1->3)-fucosyltransferase activity  alpha-(1->3)-fucosyltransferase activity  
NDEx NetworkFUT10
Atlas of Cancer Signalling NetworkFUT10
Wikipedia pathwaysFUT10
Orthology - Evolution
OrthoDB84750
GeneTree (enSembl)ENSG00000172728
Phylogenetic Trees/Animal Genes : TreeFamFUT10
Homologs : HomoloGeneFUT10
Homology/Alignments : Family Browser (UCSC)FUT10
Gene fusions - Rearrangements
Fusion : QuiverFUT10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFUT10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FUT10
dbVarFUT10
ClinVarFUT10
MonarchFUT10
1000_GenomesFUT10 
Exome Variant ServerFUT10
GNOMAD BrowserENSG00000172728
Varsome BrowserFUT10
ACMGFUT10 variants
VarityQ6P4F1
Genomic Variants (DGV)FUT10 [DGVbeta]
DECIPHERFUT10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFUT10 
Mutations
ICGC Data PortalFUT10 
TCGA Data PortalFUT10 
Broad Tumor PortalFUT10
OASIS PortalFUT10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFUT10  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DFUT10
Mutations and Diseases : HGMDFUT10
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaFUT10
DgiDB (Drug Gene Interaction Database)FUT10
DoCM (Curated mutations)FUT10
CIViC (Clinical Interpretations of Variants in Cancer)FUT10
Cancer3DFUT10
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616931   
Orphanet
DisGeNETFUT10
MedgenFUT10
Genetic Testing Registry FUT10
NextProtQ6P4F1 [Medical]
GENETestsFUT10
Target ValidationFUT10
Huge Navigator FUT10 [HugePedia]
ClinGenFUT10
Clinical trials, drugs, therapy
MyCancerGenomeFUT10
Protein Interactions : CTDFUT10
Pharm GKB GenePA134872572
PharosQ6P4F1
Clinical trialFUT10
Miscellaneous
canSAR (ICR)FUT10
HarmonizomeFUT10
ARCHS4FUT10
DataMed IndexFUT10
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXFUT10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:19:58 CET 2022
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