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FUT11 (fucosyltransferase 11)

Identity

Alias_names3) fucosyltransferase
Alias_symbol (synonym)MGC33202
Other alias-
HGNC (Hugo) FUT11
LocusID (NCBI) 170384
Atlas_Id 53937
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 73772291 and ends at 73776218 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FUT11   19233
Cards
Entrez_Gene (NCBI)FUT11  170384  fucosyltransferase 11
Aliases
GeneCards (Weizmann)FUT11
Ensembl hg19 (Hinxton)ENSG00000196968 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196968 [Gene_View]  chr10:73772291-73776218 [Contig_View]  FUT11 [Vega]
ICGC DataPortalENSG00000196968
TCGA cBioPortalFUT11
AceView (NCBI)FUT11
Genatlas (Paris)FUT11
WikiGenes170384
SOURCE (Princeton)FUT11
Genetics Home Reference (NIH)FUT11
Genomic and cartography
GoldenPath hg38 (UCSC)FUT11  -     chr10:73772291-73776218 +  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FUT11  -     10q22.2   [Description]    (hg19-Feb_2009)
EnsemblFUT11 - 10q22.2 [CytoView hg19]  FUT11 - 10q22.2 [CytoView hg38]
Mapping of homologs : NCBIFUT11 [Mapview hg19]  FUT11 [Mapview hg38]
OMIM616932   
Gene and transcription
Genbank (Entrez)AK095482 AK314944 BC036037 BC100994 BC100995
RefSeq transcript (Entrez)NM_001284194 NM_173540
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FUT11
Cluster EST : UnigeneHs.588854 [ NCBI ]
CGAP (NCI)Hs.588854
Alternative Splicing GalleryENSG00000196968
Gene ExpressionFUT11 [ NCBI-GEO ]   FUT11 [ EBI - ARRAY_EXPRESS ]   FUT11 [ SEEK ]   FUT11 [ MEM ]
Gene Expression Viewer (FireBrowse)FUT11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)170384
GTEX Portal (Tissue expression)FUT11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ495W5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ495W5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ495W5
Splice isoforms : SwissVarQ495W5
Catalytic activity : Enzyme2.4.1.- [ Enzyme-Expasy ]   2.4.1.-2.4.1.- [ IntEnz-EBI ]   2.4.1.- [ BRENDA ]   2.4.1.- [ KEGG ]   
PhosPhoSitePlusQ495W5
Domains : Interpro (EBI)Alpha-1_3-FUT_met    Glyco_tran_10_N    Glyco_trans_10   
Domain families : Pfam (Sanger)Glyco_tran_10_N (PF17039)    Glyco_transf_10 (PF00852)   
Domain families : Pfam (NCBI)pfam17039    pfam00852   
Conserved Domain (NCBI)FUT11
DMDM Disease mutations170384
Blocks (Seattle)FUT11
SuperfamilyQ495W5
Human Protein AtlasENSG00000196968
Peptide AtlasQ495W5
HPRD13555
IPIIPI00217759   IPI00647266   
Protein Interaction databases
DIP (DOE-UCLA)Q495W5
IntAct (EBI)Q495W5
FunCoupENSG00000196968
BioGRIDFUT11
STRING (EMBL)FUT11
ZODIACFUT11
Ontologies - Pathways
QuickGOQ495W5
Ontology : AmiGOGolgi membrane  protein binding  protein glycosylation  integral component of membrane  Golgi cisterna membrane  fucosylation  alpha-(1->3)-fucosyltransferase activity  extracellular exosome  
Ontology : EGO-EBIGolgi membrane  protein binding  protein glycosylation  integral component of membrane  Golgi cisterna membrane  fucosylation  alpha-(1->3)-fucosyltransferase activity  extracellular exosome  
NDEx NetworkFUT11
Atlas of Cancer Signalling NetworkFUT11
Wikipedia pathwaysFUT11
Orthology - Evolution
OrthoDB170384
GeneTree (enSembl)ENSG00000196968
Phylogenetic Trees/Animal Genes : TreeFamFUT11
HOVERGENQ495W5
HOGENOMQ495W5
Homologs : HomoloGeneFUT11
Homology/Alignments : Family Browser (UCSC)FUT11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFUT11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FUT11
dbVarFUT11
ClinVarFUT11
1000_GenomesFUT11 
Exome Variant ServerFUT11
ExAC (Exome Aggregation Consortium)FUT11 (select the gene name)
Genetic variants : HAPMAP170384
Genomic Variants (DGV)FUT11 [DGVbeta]
DECIPHERFUT11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFUT11 
Mutations
ICGC Data PortalFUT11 
TCGA Data PortalFUT11 
Broad Tumor PortalFUT11
OASIS PortalFUT11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFUT11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFUT11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FUT11
DgiDB (Drug Gene Interaction Database)FUT11
DoCM (Curated mutations)FUT11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FUT11 (select a term)
intoGenFUT11
Cancer3DFUT11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616932   
Orphanet
MedgenFUT11
Genetic Testing Registry FUT11
NextProtQ495W5 [Medical]
TSGene170384
GENETestsFUT11
Huge Navigator FUT11 [HugePedia]
snp3D : Map Gene to Disease170384
BioCentury BCIQFUT11
ClinGenFUT11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD170384
Chemical/Pharm GKB GenePA134914077
Clinical trialFUT11
Miscellaneous
canSAR (ICR)FUT11 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFUT11
EVEXFUT11
GoPubMedFUT11
iHOPFUT11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:16:33 CEST 2017

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