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FUT7 (fucosyltransferase 7)

Identity

Alias_names3) fucosyltransferase
Other aliasFucT-VII
HGNC (Hugo) FUT7
LocusID (NCBI) 2529
Atlas_Id 51731
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 137030174 and ends at 137032840 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)FUT7   4018
Cards
Entrez_Gene (NCBI)FUT7  2529  fucosyltransferase 7
AliasesFucT-VII
GeneCards (Weizmann)FUT7
Ensembl hg19 (Hinxton)ENSG00000180549 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180549 [Gene_View]  chr9:137030174-137032840 [Contig_View]  FUT7 [Vega]
ICGC DataPortalENSG00000180549
TCGA cBioPortalFUT7
AceView (NCBI)FUT7
Genatlas (Paris)FUT7
WikiGenes2529
SOURCE (Princeton)FUT7
Genetics Home Reference (NIH)FUT7
Genomic and cartography
GoldenPath hg38 (UCSC)FUT7  -     chr9:137030174-137032840 -  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)FUT7  -     9q34.3   [Description]    (hg19-Feb_2009)
EnsemblFUT7 - 9q34.3 [CytoView hg19]  FUT7 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBIFUT7 [Mapview hg19]  FUT7 [Mapview hg38]
OMIM602030   
Gene and transcription
Genbank (Entrez)AK313124 BC032357 BC074746 BC086312 U08112
RefSeq transcript (Entrez)NM_004479
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)FUT7
Cluster EST : UnigeneHs.457 [ NCBI ]
CGAP (NCI)Hs.457
Alternative Splicing GalleryENSG00000180549
Gene ExpressionFUT7 [ NCBI-GEO ]   FUT7 [ EBI - ARRAY_EXPRESS ]   FUT7 [ SEEK ]   FUT7 [ MEM ]
Gene Expression Viewer (FireBrowse)FUT7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2529
GTEX Portal (Tissue expression)FUT7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ11130   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ11130  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ11130
Splice isoforms : SwissVarQ11130
Catalytic activity : Enzyme2.4.1.- [ Enzyme-Expasy ]   2.4.1.-2.4.1.- [ IntEnz-EBI ]   2.4.1.- [ BRENDA ]   2.4.1.- [ KEGG ]   
PhosPhoSitePlusQ11130
Domains : Interpro (EBI)Glyco_tran_10_N    Glyco_trans_10   
Domain families : Pfam (Sanger)Glyco_tran_10_N (PF17039)    Glyco_transf_10 (PF00852)   
Domain families : Pfam (NCBI)pfam17039    pfam00852   
Conserved Domain (NCBI)FUT7
DMDM Disease mutations2529
Blocks (Seattle)FUT7
SuperfamilyQ11130
Human Protein AtlasENSG00000180549
Peptide AtlasQ11130
HPRD03611
IPIIPI00009217   
Protein Interaction databases
DIP (DOE-UCLA)Q11130
IntAct (EBI)Q11130
FunCoupENSG00000180549
BioGRIDFUT7
STRING (EMBL)FUT7
ZODIACFUT7
Ontologies - Pathways
QuickGOQ11130
Ontology : AmiGOGolgi membrane  CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation  leukocyte migration involved in immune response  Golgi apparatus  Golgi apparatus  protein glycosylation  protein glycosylation  fucosyltransferase activity  membrane  integral component of membrane  Golgi cisterna membrane  fucosylation  L-fucose catabolic process  alpha-(1->3)-fucosyltransferase activity  
Ontology : EGO-EBIGolgi membrane  CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation  leukocyte migration involved in immune response  Golgi apparatus  Golgi apparatus  protein glycosylation  protein glycosylation  fucosyltransferase activity  membrane  integral component of membrane  Golgi cisterna membrane  fucosylation  L-fucose catabolic process  alpha-(1->3)-fucosyltransferase activity  
Pathways : BIOCARTASteps in the Glycosylation of Mammalian N-linked Oligosaccarides [Genes]   
Pathways : KEGGOther types of O-glycan biosynthesis    Glycosphingolipid biosynthesis - lacto and neolacto series   
NDEx NetworkFUT7
Atlas of Cancer Signalling NetworkFUT7
Wikipedia pathwaysFUT7
Orthology - Evolution
OrthoDB2529
GeneTree (enSembl)ENSG00000180549
Phylogenetic Trees/Animal Genes : TreeFamFUT7
HOVERGENQ11130
HOGENOMQ11130
Homologs : HomoloGeneFUT7
Homology/Alignments : Family Browser (UCSC)FUT7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerFUT7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)FUT7
dbVarFUT7
ClinVarFUT7
1000_GenomesFUT7 
Exome Variant ServerFUT7
ExAC (Exome Aggregation Consortium)FUT7 (select the gene name)
Genetic variants : HAPMAP2529
Genomic Variants (DGV)FUT7 [DGVbeta]
DECIPHERFUT7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisFUT7 
Mutations
ICGC Data PortalFUT7 
TCGA Data PortalFUT7 
Broad Tumor PortalFUT7
OASIS PortalFUT7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICFUT7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDFUT7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch FUT7
DgiDB (Drug Gene Interaction Database)FUT7
DoCM (Curated mutations)FUT7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)FUT7 (select a term)
intoGenFUT7
Cancer3DFUT7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602030   
Orphanet
MedgenFUT7
Genetic Testing Registry FUT7
NextProtQ11130 [Medical]
TSGene2529
GENETestsFUT7
Target ValidationFUT7
Huge Navigator FUT7 [HugePedia]
snp3D : Map Gene to Disease2529
BioCentury BCIQFUT7
ClinGenFUT7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2529
Chemical/Pharm GKB GenePA28434
Clinical trialFUT7
Miscellaneous
canSAR (ICR)FUT7 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineFUT7
EVEXFUT7
GoPubMedFUT7
iHOPFUT7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:09:07 CEST 2017

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