FXR2 (fragile X mental retardation, autosomal homolog 2)

Identity

Other names	FMR1L2
HGNC	FXR2
Location	17p13.1
Location_base_pair	Starts at 7435272 and ends at 7458796 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	FXR2   4024
Entrez_Gene	FXR2  9513  fragile X mental retardation, autosomal homolog 2
	Cards
GeneCards	FXR2
Ensembl	FXR2 [Search_View]   ENSG00000129245 [Gene_View]
Genatlas	FXR2
GeneLynx	FXR2
eGenome	FXR2
euGene	9513
	Genomic and cartography
GoldenPath	FXR2  -  17p13.1   chr17:7435272-7458796 -  17p13.1   [Description]    (hg18-March_2006)
Ensembl	FXR2 - 17p13.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	FXR2
	Gene and transcription
Genbank	AK226082 [ ENTREZ ]
Genbank	AK313836 [ ENTREZ ]
Genbank	BC020090 [ ENTREZ ]
Genbank	BC051907 [ ENTREZ ]
Genbank	BC067272 [ ENTREZ ]
RefSeq	NM_004860 [ SRS ]    NM_004860 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	FXR2 AceView - NCBI
Unigene	Hs.52788 [ SRS ]    Hs.52788 [ NCBI ]     HS52788 [ spliceNest ]
Fast-db	3174 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P51116 [ SRS]    P51116 [ EXPASY ]     P51116 [ INTERPRO ]     P51116 [ UNIPROT ]
Prosite	PS50084 KH_TYPE_1 [ SRS ]    PS50084 KH_TYPE_1 [ Expasy ]
Interpro	IPR008395 Agenet [ SRS ]    IPR008395 Agenet [ EBI ]
Interpro	IPR004087 KH [ SRS ]    IPR004087 KH [ EBI ]
Interpro	IPR004088 KH_type_1 [ SRS ]    IPR004088 KH_type_1 [ EBI ]
CluSTr	P51116
Pfam	PF05641 Agenet [ SRS ]    PF05641 Agenet [ Sanger ]    pfam05641 [ NCBI-CDD ]
Pfam	PF00013 KH_1 [ SRS ]    PF00013 KH_1 [ Sanger ]    pfam00013 [ NCBI-CDD ]
Smart	SM00322 KH [EMBL]
Blocks	P51116
HPRD	05629
	Protein Interaction databases
DIP	P51116
IntAct	P51116
	Polymorphism : SNP, mutations, diseases
OMIM	605339    [ map ]
GENECLINICS	605339
SNP	FXR2 [dbSNP-NCBI]
SNP	NM_004860 [SNP-NCI]
SNP	FXR2 [GeneSNPs - Utah]  FXR2] [HGBASE - SRS]
HAPMAP	FXR2 [HAPMAP]
HGMD	FXR2
	General knowledge
Family Browser	FXR2 [UCSC Family Browser]
SOURCE	NM_004860
SMD	Hs.52788
SAGE	Hs.52788
GO	RNA binding [Amigo]  RNA binding
GO	protein binding [Amigo]  protein binding
GO	cytoplasm [Amigo]  cytoplasm
GO	cytosolic large ribosomal subunit [Amigo]  cytosolic large ribosomal subunit
PubGene	FXR2
TreeFam	FXR2
CTD	9513 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FXR2 Related clones (RZPD - Berlin)
	PubMed
PubMed	18 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:42:21 2008