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G0S2 (G0/G1 switch 2)

Identity

Alias_namesG0/G1switch 2
Other alias-
HGNC (Hugo) G0S2
LocusID (NCBI) 50486
Atlas_Id 40660
Location 1q32.2  [Link to chromosome band 1q32]
Location_base_pair Starts at 209675325 and ends at 209676390 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)G0S2   30229
Cards
Entrez_Gene (NCBI)G0S2  50486  G0/G1 switch 2
Aliases
GeneCards (Weizmann)G0S2
Ensembl hg19 (Hinxton)ENSG00000123689 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000123689 [Gene_View]  chr1:209675325-209676390 [Contig_View]  G0S2 [Vega]
ICGC DataPortalENSG00000123689
TCGA cBioPortalG0S2
AceView (NCBI)G0S2
Genatlas (Paris)G0S2
WikiGenes50486
SOURCE (Princeton)G0S2
Genetics Home Reference (NIH)G0S2
Genomic and cartography
GoldenPath hg38 (UCSC)G0S2  -     chr1:209675325-209676390 +  1q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)G0S2  -     1q32.2   [Description]    (hg19-Feb_2009)
EnsemblG0S2 - 1q32.2 [CytoView hg19]  G0S2 - 1q32.2 [CytoView hg38]
Mapping of homologs : NCBIG0S2 [Mapview hg19]  G0S2 [Mapview hg38]
OMIM614447   
Gene and transcription
Genbank (Entrez)AV709160 BC009694 BM788126 BT007101 CR542179
RefSeq transcript (Entrez)NM_015714
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)G0S2
Cluster EST : UnigeneHs.432132 [ NCBI ]
CGAP (NCI)Hs.432132
Alternative Splicing GalleryENSG00000123689
Gene ExpressionG0S2 [ NCBI-GEO ]   G0S2 [ EBI - ARRAY_EXPRESS ]   G0S2 [ SEEK ]   G0S2 [ MEM ]
Gene Expression Viewer (FireBrowse)G0S2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50486
GTEX Portal (Tissue expression)G0S2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP27469   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP27469  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP27469
Splice isoforms : SwissVarP27469
PhosPhoSitePlusP27469
Domains : Interpro (EBI)G0S2   
Domain families : Pfam (Sanger)G0-G1_switch_2 (PF15103)   
Domain families : Pfam (NCBI)pfam15103   
Conserved Domain (NCBI)G0S2
DMDM Disease mutations50486
Blocks (Seattle)G0S2
SuperfamilyP27469
Human Protein AtlasENSG00000123689
Peptide AtlasP27469
HPRD09968
IPIIPI00018915   
Protein Interaction databases
DIP (DOE-UCLA)P27469
IntAct (EBI)P27469
FunCoupENSG00000123689
BioGRIDG0S2
STRING (EMBL)G0S2
ZODIACG0S2
Ontologies - Pathways
QuickGOP27469
Ontology : AmiGOmolecular_function  protein binding  mitochondrion  lipid particle  extrinsic apoptotic signaling pathway  positive regulation of extrinsic apoptotic signaling pathway  
Ontology : EGO-EBImolecular_function  protein binding  mitochondrion  lipid particle  extrinsic apoptotic signaling pathway  positive regulation of extrinsic apoptotic signaling pathway  
NDEx NetworkG0S2
Atlas of Cancer Signalling NetworkG0S2
Wikipedia pathwaysG0S2
Orthology - Evolution
OrthoDB50486
GeneTree (enSembl)ENSG00000123689
Phylogenetic Trees/Animal Genes : TreeFamG0S2
HOVERGENP27469
HOGENOMP27469
Homologs : HomoloGeneG0S2
Homology/Alignments : Family Browser (UCSC)G0S2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerG0S2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)G0S2
dbVarG0S2
ClinVarG0S2
1000_GenomesG0S2 
Exome Variant ServerG0S2
ExAC (Exome Aggregation Consortium)G0S2 (select the gene name)
Genetic variants : HAPMAP50486
Genomic Variants (DGV)G0S2 [DGVbeta]
DECIPHERG0S2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisG0S2 
Mutations
ICGC Data PortalG0S2 
TCGA Data PortalG0S2 
Broad Tumor PortalG0S2
OASIS PortalG0S2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICG0S2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDG0S2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch G0S2
DgiDB (Drug Gene Interaction Database)G0S2
DoCM (Curated mutations)G0S2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)G0S2 (select a term)
intoGenG0S2
Cancer3DG0S2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614447   
Orphanet
MedgenG0S2
Genetic Testing Registry G0S2
NextProtP27469 [Medical]
TSGene50486
GENETestsG0S2
Target ValidationG0S2
Huge Navigator G0S2 [HugePedia]
snp3D : Map Gene to Disease50486
BioCentury BCIQG0S2
ClinGenG0S2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50486
Chemical/Pharm GKB GenePA142671707
Clinical trialG0S2
Miscellaneous
canSAR (ICR)G0S2 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineG0S2
EVEXG0S2
GoPubMedG0S2
iHOPG0S2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:53:54 CEST 2017

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